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A Crowdsourcing Approach to Develop Machine Learning Models to Quantify Radiographic Joint Damage in Rheumatoid Arthritis.
JAMA Netw Open. 2022 Aug 1;5(8):e2227423. doi: 10.1001/jamanetworkopen.2022.27423.
JAMA Netw Open. 2022.
PMID: 36036935
Free PMC article.
Crowdsourcing assessment of maternal blood multi-omics for predicting gestational age and preterm birth.
Tarca AL, Pataki BÁ, Romero R, Sirota M, Guan Y, Kutum R, Gomez-Lopez N, Done B, Bhatti G, Yu T, Andreoletti G, Chaiworapongsa T; DREAM Preterm Birth Prediction Challenge Consortium; Hassan SS, Hsu CD, Aghaeepour N, Stolovitzky G, Csabai I, Costello JC.
Tarca AL, et al. Among authors: pataki ba.
Cell Rep Med. 2021 Jun 15;2(6):100323. doi: 10.1016/j.xcrm.2021.100323. eCollection 2021 Jun 15.
Cell Rep Med. 2021.
PMID: 34195686
Free PMC article.
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Crowdsourcing digital health measures to predict Parkinson's disease severity: the Parkinson's Disease Digital Biomarker DREAM Challenge.
Sieberts SK, Schaff J, Duda M, Pataki BÁ, Sun M, Snyder P, Daneault JF, Parisi F, Costante G, Rubin U, Banda P, Chae Y, Chaibub Neto E, Dorsey ER, Aydın Z, Chen A, Elo LL, Espino C, Glaab E, Goan E, Golabchi FN, Görmez Y, Jaakkola MK, Jonnagaddala J, Klén R, Li D, McDaniel C, Perrin D, Perumal TM, Rad NM, Rainaldi E, Sapienza S, Schwab P, Shokhirev N, Venäläinen MS, Vergara-Diaz G, Zhang Y; Parkinson’s Disease Digital Biomarker Challenge Consortium; Wang Y, Guan Y, Brunner D, Bonato P, Mangravite LM, Omberg L.
Sieberts SK, et al. Among authors: pataki ba.
NPJ Digit Med. 2021 Mar 19;4(1):53. doi: 10.1038/s41746-021-00414-7.
NPJ Digit Med. 2021.
PMID: 33742069
Free PMC article.
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HunCRC: annotated pathological slides to enhance deep learning applications in colorectal cancer screening.
Pataki BÁ, Olar A, Ribli D, Pesti A, Kontsek E, Gyöngyösi B, Bilecz Á, Kovács T, Kovács KA, Kramer Z, Kiss A, Szócska M, Pollner P, Csabai I.
Pataki BÁ, et al.
Sci Data. 2022 Jun 28;9(1):370. doi: 10.1038/s41597-022-01450-y.
Sci Data. 2022.
PMID: 35764660
Free PMC article.
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Understanding and predicting ciprofloxacin minimum inhibitory concentration in Escherichia coli with machine learning.
Pataki BÁ, Matamoros S, van der Putten BCL, Remondini D, Giampieri E, Aytan-Aktug D, Hendriksen RS, Lund O, Csabai I, Schultsz C; SPS COMPARE ML-AMR group.
Pataki BÁ, et al.
Sci Rep. 2020 Sep 14;10(1):15026. doi: 10.1038/s41598-020-71693-5.
Sci Rep. 2020.
PMID: 32929164
Free PMC article.
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Deep learning identification for citizen science surveillance of tiger mosquitoes.
Pataki BA, Garriga J, Eritja R, Palmer JRB, Bartumeus F, Csabai I.
Pataki BA, et al.
Sci Rep. 2021 Feb 25;11(1):4718. doi: 10.1038/s41598-021-83657-4.
Sci Rep. 2021.
PMID: 33633197
Free PMC article.
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Accelerating surveillance and research of antimicrobial resistance - an online repository for sharing of antimicrobial susceptibility data associated with whole-genome sequences.
Matamoros S, Hendriksen RS, Pataki BÁ, Pakseresht N, Rossello M, Silvester N, Amid C, Aarestrup FM, Koopmans M, Cochrane G, Csabai I, Lund O, Schultsz C, The Compare Ml-Amr Group.
Matamoros S, et al. Among authors: pataki ba.
Microb Genom. 2020 May;6(5):e000342. doi: 10.1099/mgen.0.000342. Epub 2020 Mar 30.
Microb Genom. 2020.
PMID: 32255760
Free PMC article.
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The COMPARE Data Hubs.
Amid C, Pakseresht N, Silvester N, Jayathilaka S, Lund O, Dynovski LD, Pataki BÁ, Visontai D, Xavier BB, Alako BTF, Belka A, Cisneros JLB, Cotten M, Haringhuizen GB, Harrison PW, Höper D, Holt S, Hundahl C, Hussein A, Kaas RS, Liu X, Leinonen R, Malhotra-Kumar S, Nieuwenhuijse DF, Rahman N, Dos S Ribeiro C, Skiby JE, Schmitz D, Stéger J, Szalai-Gindl JM, Thomsen MCF, Cacciò SM, Csabai I, Kroneman A, Koopmans M, Aarestrup F, Cochrane G.
Amid C, et al. Among authors: pataki ba.
Database (Oxford). 2019 Jan 1;2019:baz136. doi: 10.1093/database/baz136.
Database (Oxford). 2019.
PMID: 31868882
Free PMC article.
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