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Page 1
Genomic characterization of invasive typhoidal and non-typhoidal Salmonella in southwestern Nigeria.
Ikhimiukor OO, Oaikhena AO, Afolayan AO, Fadeyi A, Kehinde A, Ogunleye VO, Aboderin AO, Oduyebo OO, Elikwu CJ, Odih EE, Komolafe I, Argimón S, Egwuenu A, Adebiyi I, Sadare OA, Okwor T, Kekre M, Underwood A, Ihekweazu C, Aanensen DM, Okeke IN. Ikhimiukor OO, et al. Among authors: aanensen dm. PLoS Negl Trop Dis. 2022 Aug 26;16(8):e0010716. doi: 10.1371/journal.pntd.0010716. eCollection 2022 Aug. PLoS Negl Trop Dis. 2022. PMID: 36026470 Free PMC article.
Species Mash-up.
Argimón S, Aanensen DM. Argimón S, et al. Among authors: aanensen dm. Nat Rev Microbiol. 2016 Nov 11;14(12):730. doi: 10.1038/nrmicro.2016.175. Nat Rev Microbiol. 2016. PMID: 27833107 No abstract available.
The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa.
Park SE, Pham DT, Boinett C, Wong VK, Pak GD, Panzner U, Espinoza LMC, von Kalckreuth V, Im J, Schütt-Gerowitt H, Crump JA, Breiman RF, Adu-Sarkodie Y, Owusu-Dabo E, Rakotozandrindrainy R, Soura AB, Aseffa A, Gasmelseed N, Keddy KH, May J, Sow AG, Aaby P, Biggs HM, Hertz JT, Montgomery JM, Cosmas L, Olack B, Fields B, Sarpong N, Razafindrabe TJL, Raminosoa TM, Kabore LP, Sampo E, Teferi M, Yeshitela B, El Tayeb MA, Sooka A, Meyer CG, Krumkamp R, Dekker DM, Jaeger A, Poppert S, Tall A, Niang A, Bjerregaard-Andersen M, Løfberg SV, Seo HJ, Jeon HJ, Deerin JF, Park J, Konings F, Ali M, Clemens JD, Hughes P, Sendagala JN, Vudriko T, Downing R, Ikumapayi UN, Mackenzie GA, Obaro S, Argimon S, Aanensen DM, Page A, Keane JA, Duchene S, Dyson Z, Holt KE, Dougan G, Marks F, Baker S. Park SE, et al. Among authors: aanensen dm. Nat Commun. 2018 Nov 30;9(1):5094. doi: 10.1038/s41467-018-07370-z. Nat Commun. 2018. PMID: 30504848 Free PMC article.
Integrating whole-genome sequencing within the National Antimicrobial Resistance Surveillance Program in the Philippines.
Argimón S, Masim MAL, Gayeta JM, Lagrada ML, Macaranas PKV, Cohen V, Limas MT, Espiritu HO, Palarca JC, Chilam J, Jamoralin MC Jr, Villamin AS, Borlasa JB, Olorosa AM, Hernandez LFT, Boehme KD, Jeffrey B, Abudahab K, Hufano CM, Sia SB, Stelling J, Holden MTG, Aanensen DM, Carlos CC. Argimón S, et al. Among authors: aanensen dm. Nat Commun. 2020 Jun 1;11(1):2719. doi: 10.1038/s41467-020-16322-5. Nat Commun. 2020. PMID: 32483195 Free PMC article.
A community-driven resource for genomic epidemiology and antimicrobial resistance prediction of Neisseria gonorrhoeae at Pathogenwatch.
Sánchez-Busó L, Yeats CA, Taylor B, Goater RJ, Underwood A, Abudahab K, Argimón S, Ma KC, Mortimer TD, Golparian D, Cole MJ, Grad YH, Martin I, Raphael BH, Shafer WM, Town K, Wi T, Harris SR, Unemo M, Aanensen DM. Sánchez-Busó L, et al. Among authors: aanensen dm. Genome Med. 2021 Apr 19;13(1):61. doi: 10.1186/s13073-021-00858-2. Genome Med. 2021. PMID: 33875000 Free PMC article.
A global resource for genomic predictions of antimicrobial resistance and surveillance of Salmonella Typhi at pathogenwatch.
Argimón S, Yeats CA, Goater RJ, Abudahab K, Taylor B, Underwood A, Sánchez-Busó L, Wong VK, Dyson ZA, Nair S, Park SE, Marks F, Page AJ, Keane JA, Baker S, Holt KE, Dougan G, Aanensen DM. Argimón S, et al. Among authors: aanensen dm. Nat Commun. 2021 May 17;12(1):2879. doi: 10.1038/s41467-021-23091-2. Nat Commun. 2021. PMID: 34001879 Free PMC article.
Genomic surveillance of methicillin-resistant Staphylococcus aureus in the Philippines, 
2013-2014.
Masim ML, Argimón S, Espiritu HO, Magbanua MA, Lagrada ML, Olorosa AM, Cohen V, Gayeta JM, Jeffrey B, Abudahab K, Hufano CM, Sia SB, Holden MTG, Stelling J, Aanensen DM, Carlos CC; Philippines Antimicrobial Resistance Surveillance Program. Masim ML, et al. Among authors: aanensen dm. Western Pac Surveill Response J. 2021 Feb 26;12(1):6-16. doi: 10.5365/wpsar.2020.11.1.004. eCollection 2021 Jan-Mar. Western Pac Surveill Response J. 2021. PMID: 34094618 Free PMC article.
Genomic surveillance of Pseudomonas aeruginosa in the Philippines, 2013-2014.
Chilam J, Argimón S, Limas MT, Masim ML, Gayeta JM, Lagrada ML, Olorosa AM, Cohen V, Hernandez LT, Jeffrey B, Abudahab K, Hufano CM, Sia SB, Holden MTG, Stelling J, Aanensen DM, Carlos CC; Philippines Antimicrobial Resistance Surveillance Program. Chilam J, et al. Among authors: aanensen dm. Western Pac Surveill Response J. 2021 Apr 28;12(2):4-18. doi: 10.5365/wpsar.2020.11.1.006. eCollection 2021 Apr-Jun. Western Pac Surveill Response J. 2021. PMID: 34540307 Free PMC article.
153 results