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Learning size-adaptive molecular substructures for explainable drug-drug interaction prediction by substructure-aware graph neural network.
Chem Sci. 2022 Jul 13;13(29):8693-8703. doi: 10.1039/d2sc02023h. eCollection 2022 Jul 29.
Chem Sci. 2022.
PMID: 35974769
Free PMC article.
MGraphDTA: deep multiscale graph neural network for explainable drug-target binding affinity prediction.
Yang Z, Zhong W, Zhao L, Yu-Chian Chen C.
Yang Z, et al. Among authors: yu chian chen c.
Chem Sci. 2022 Jan 5;13(3):816-833. doi: 10.1039/d1sc05180f. eCollection 2022 Jan 19.
Chem Sci. 2022.
PMID: 35173947
Free PMC article.
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Graph convolutional network approach to investigate potential selective Limk1 inhibitors.
Zhong W, Zhao L, Yang Z, Yu-Chian Chen C.
Zhong W, et al. Among authors: yu chian chen c.
J Mol Graph Model. 2021 Sep;107:107965. doi: 10.1016/j.jmgm.2021.107965. Epub 2021 Jun 16.
J Mol Graph Model. 2021.
PMID: 34167067
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Mol2Context-vec: learning molecular representation from context awareness for drug discovery.
Lv Q, Chen G, Zhao L, Zhong W, Yu-Chian Chen C.
Lv Q, et al. Among authors: yu chian chen c.
Brief Bioinform. 2021 Nov 5;22(6):bbab317. doi: 10.1093/bib/bbab317.
Brief Bioinform. 2021.
PMID: 34428290
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3DGT-DDI: 3D graph and text based neural network for drug-drug interaction prediction.
He H, Chen G, Yu-Chian Chen C.
He H, et al. Among authors: yu chian chen c.
Brief Bioinform. 2022 May 13;23(3):bbac134. doi: 10.1093/bib/bbac134.
Brief Bioinform. 2022.
PMID: 35511112
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Parkinson's severity diagnosis explainable model based on 3D multi-head attention residual network.
Huang J, Lin L, Yu F, He X, Song W, Lin J, Tang Z, Yuan K, Li Y, Huang H, Pei Z, Xian W, Yu-Chian Chen C.
Huang J, et al. Among authors: yu chian chen c.
Comput Biol Med. 2024 Mar;170:107959. doi: 10.1016/j.compbiomed.2024.107959. Epub 2024 Jan 3.
Comput Biol Med. 2024.
PMID: 38215619
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Geometric Interaction Graph Neural Network for Predicting Protein-Ligand Binding Affinities from 3D Structures (GIGN).
Yang Z, Zhong W, Lv Q, Dong T, Yu-Chian Chen C.
Yang Z, et al. Among authors: yu chian chen c.
J Phys Chem Lett. 2023 Mar 2;14(8):2020-2033. doi: 10.1021/acs.jpclett.2c03906. Epub 2023 Feb 16.
J Phys Chem Lett. 2023.
PMID: 36794930
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