Cox MP - Search Results

1

Telomere-to-Telomere Genome Sequences across a Single Genus Reveal Highly Variable Chromosome Rearrangement Rates but Absolute Stasis of Chromosome Number.

Quenu M, Treindl AD, Lee K, Takemoto D, Thünen T, Ashrafi S, Winter D, Ganley ARD, Leuchtmann A, Young CA, Cox MP. Quenu M, et al. Among authors: cox mp. J Fungi (Basel). 2022 Jun 25;8(7):670. doi: 10.3390/jof8070670. J Fungi (Basel). 2022. PMID: 35887427 Free PMC article.

2

Fragmentation of an aflatoxin-like gene cluster in a forest pathogen.

Bradshaw RE, Slot JC, Moore GG, Chettri P, de Wit PJGM, Ehrlich KC, Ganley ARD, Olson MA, Rokas A, Carbone I, Cox MP. Bradshaw RE, et al. Among authors: cox mp. New Phytol. 2013 Apr;198(2):525-535. doi: 10.1111/nph.12161. Epub 2013 Mar 1. New Phytol. 2013. PMID: 23448391 Free article.

3

An interspecific fungal hybrid reveals cross-kingdom rules for allopolyploid gene expression patterns.

Cox MP, Dong T, Shen G, Dalvi Y, Scott DB, Ganley AR. Cox MP, et al. PLoS Genet. 2014 Mar 6;10(3):e1004180. doi: 10.1371/journal.pgen.1004180. eCollection 2014 Mar. PLoS Genet. 2014. PMID: 24603805 Free PMC article.

4

HyLiTE: accurate and flexible analysis of gene expression in hybrid and allopolyploid species.

Duchemin W, Dupont PY, Campbell MA, Ganley AR, Cox MP. Duchemin W, et al. Among authors: cox mp. BMC Bioinformatics. 2015 Jan 16;16(1):8. doi: 10.1186/s12859-014-0433-8. BMC Bioinformatics. 2015. PMID: 25592117 Free PMC article.

5

The Case of the Missing Ancient Fungal Polyploids.

Campbell MA, Ganley AR, Gabaldón T, Cox MP. Campbell MA, et al. Among authors: cox mp. Am Nat. 2016 Dec;188(6):602-614. doi: 10.1086/688763. Epub 2016 Sep 26. Am Nat. 2016. PMID: 27860510 Review.

6

Epichloë hybrida, sp. nov., an emerging model system for investigating fungal allopolyploidy.

Campbell MA, Tapper BA, Simpson WR, Johnson RD, Mace W, Ram A, Lukito Y, Dupont PY, Johnson LJ, Scott DB, Ganley ARD, Cox MP. Campbell MA, et al. Among authors: cox mp. Mycologia. 2017;109(5):715-729. doi: 10.1080/00275514.2017.1406174. Epub 2018 Jan 25. Mycologia. 2017. PMID: 29370579

7

Repeat elements organise 3D genome structure and mediate transcription in the filamentous fungus Epichloë festucae.

Winter DJ, Ganley ARD, Young CA, Liachko I, Schardl CL, Dupont PY, Berry D, Ram A, Scott B, Cox MP. Winter DJ, et al. Among authors: cox mp. PLoS Genet. 2018 Oct 24;14(10):e1007467. doi: 10.1371/journal.pgen.1007467. eCollection 2018 Oct. PLoS Genet. 2018. PMID: 30356280 Free PMC article.

8

Complex epigenetic regulation of alkaloid biosynthesis and host interaction by heterochromatin protein I in a fungal endophyte-plant symbiosis.

Chujo T, Lukito Y, Eaton CJ, Dupont PY, Johnson LJ, Winter D, Cox MP, Scott B. Chujo T, et al. Among authors: cox mp. Fungal Genet Biol. 2019 Apr;125:71-83. doi: 10.1016/j.fgb.2019.02.001. Epub 2019 Feb 4. Fungal Genet Biol. 2019. PMID: 30731202

9

Chromosome-Level Reference Genome of Venturia effusa, Causative Agent of Pecan Scab.

Winter DJ, Charlton ND, Krom N, Shiller J, Bock CH, Cox MP, Young CA. Winter DJ, et al. Among authors: cox mp. Mol Plant Microbe Interact. 2020 Feb;33(2):149-152. doi: 10.1094/MPMI-08-19-0236-A. Epub 2019 Dec 2. Mol Plant Microbe Interact. 2020. PMID: 31631770 Free article.

10

Regulation of host-infection ability in the grass-symbiotic fungus Epichloë festucae by histone H3K9 and H3K36 methyltransferases.

Lukito Y, Lee K, Noorifar N, Green KA, Winter DJ, Ram A, Hale TK, Chujo T, Cox MP, Johnson LJ, Scott B. Lukito Y, et al. Among authors: cox mp. Environ Microbiol. 2021 Apr;23(4):2116-2131. doi: 10.1111/1462-2920.15370. Epub 2020 Dec 31. Environ Microbiol. 2021. PMID: 33350014

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