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Multiview Incomplete Knowledge Graph Integration with application to cross-institutional EHR data harmonization.
Zhou D, Gan Z, Shi X, Patwari A, Rush E, Bonzel CL, Panickan VA, Hong C, Ho YL, Cai T, Costa L, Li X, Castro VM, Murphy SN, Brat G, Weber G, Avillach P, Gaziano JM, Cho K, Liao KP, Lu J, Cai T. Zhou D, et al. Among authors: panickan va. J Biomed Inform. 2022 Sep;133:104147. doi: 10.1016/j.jbi.2022.104147. Epub 2022 Jul 21. J Biomed Inform. 2022. PMID: 35872266 Free article.
Clinical knowledge extraction via sparse embedding regression (KESER) with multi-center large scale electronic health record data.
Hong C, Rush E, Liu M, Zhou D, Sun J, Sonabend A, Castro VM, Schubert P, Panickan VA, Cai T, Costa L, He Z, Link N, Hauser R, Gaziano JM, Murphy SN, Ostrouchov G, Ho YL, Begoli E, Lu J, Cho K, Liao KP, Cai T; VA Million Veteran Program. Hong C, et al. Among authors: panickan va. NPJ Digit Med. 2021 Oct 27;4(1):151. doi: 10.1038/s41746-021-00519-z. NPJ Digit Med. 2021. PMID: 34707226 Free PMC article.
Characterization of Post-COVID-19 Definitions and Clinical Coding Practices: Longitudinal Study.
Maripuri M, Dey A, Honerlaw J, Hong C, Ho YL, Tanukonda V, Chen AW, Panickan VA, Wang X, Zhang HG, Yang D, Samayamuthu MJ, Morris M, Visweswaran S, Beaulieu-Jones B, Ramoni R, Muralidhar S, Gaziano JM, Liao K, Xia Z, Brat GA, Cai T, Cho K. Maripuri M, et al. Among authors: panickan va. Online J Public Health Inform. 2024 May 3;16:e53445. doi: 10.2196/53445. Online J Public Health Inform. 2024. PMID: 38700929 Free PMC article.
Centralized Interactive Phenomics Resource: an integrated online phenomics knowledgebase for health data users.
Honerlaw J, Ho YL, Fontin F, Murray M, Galloway A, Heise D, Connatser K, Davies L, Gosian J, Maripuri M, Russo J, Sangar R, Tanukonda V, Zielinski E, Dubreuil M, Zimolzak AJ, Panickan VA, Cheng SC, Whitbourne SB, Gagnon DR, Cai T, Liao KP, Ramoni RB, Gaziano JM, Muralidhar S, Cho K. Honerlaw J, et al. Among authors: panickan va. J Am Med Inform Assoc. 2024 Apr 19;31(5):1126-1134. doi: 10.1093/jamia/ocae042. J Am Med Inform Assoc. 2024. PMID: 38481028 Free PMC article.
LATTE: Label-efficient incident phenotyping from longitudinal electronic health records.
Wen J, Hou J, Bonzel CL, Zhao Y, Castro VM, Gainer VS, Weisenfeld D, Cai T, Ho YL, Panickan VA, Costa L, Hong C, Gaziano JM, Liao KP, Lu J, Cho K, Cai T. Wen J, et al. Among authors: panickan va. Patterns (N Y). 2023 Dec 27;5(1):100906. doi: 10.1016/j.patter.2023.100906. eCollection 2024 Jan 12. Patterns (N Y). 2023. PMID: 38264714 Free PMC article.
Knowledge-Driven Online Multimodal Automated Phenotyping System.
Xiong X, Sweet SM, Liu M, Hong C, Bonzel CL, Panickan VA, Zhou D, Wang L, Costa L, Ho YL, Geva A, Mandl KD, Cheng S, Xia Z, Cho K, Gaziano JM, Liao KP, Cai T, Cai T. Xiong X, et al. Among authors: panickan va. medRxiv [Preprint]. 2023 Oct 2:2023.09.29.23296239. doi: 10.1101/2023.09.29.23296239. medRxiv. 2023. PMID: 37873131 Free PMC article. Preprint.
Clinical phenotypes and outcomes in children with multisystem inflammatory syndrome across SARS-CoV-2 variant eras: a multinational study from the 4CE consortium.
Sperotto F, Gutiérrez-Sacristán A, Makwana S, Li X, Rofeberg VN, Cai T, Bourgeois FT, Omenn GS, Hanauer DA, Sáez C, Bonzel CL, Bucholz E, Dionne A, Elias MD, García-Barrio N, González TG, Issitt RW, Kernan KF, Laird-Gion J, Maidlow SE, Mandl KD, Ahooyi TM, Moraleda C, Morris M, Moshal KL, Pedrera-Jiménez M, Shah MA, South AM, Spiridou A, Taylor DM, Verdy G, Visweswaran S, Wang X, Xia Z, Zachariasse JM; Consortium for Clinical Characterization of COVID-19 by EHR (4CE); Newburger JW, Avillach P. Sperotto F, et al. EClinicalMedicine. 2023 Sep 14;64:102212. doi: 10.1016/j.eclinm.2023.102212. eCollection 2023 Oct. EClinicalMedicine. 2023. PMID: 37745025 Free PMC article.
Diversity and Scale: Genetic Architecture of 2,068 Traits in the VA Million Veteran Program.
Verma A, Huffman JE, Rodriguez A, Conery M, Liu M, Ho YL, Kim Y, Heise DA, Guare L, Panickan VA, Garcon H, Linares F, Costa L, Goethert I, Tipton R, Honerlaw J, Davies L, Whitbourne S, Cohen J, Posner DC, Sangar R, Murray M, Wang X, Dochtermann DR, Devineni P, Shi Y, Nandi TN, Assimes TL, Brunette CA, Carroll RJ, Clifford R, Duvall S, Gelernter J, Hung A, Iyengar SK, Joseph J, Kember R, Kranzler H, Levey D, Luoh SW, Merritt VC, Overstreet C, Deak JD, Grant SFA, Polimanti R, Roussos P, Sun YV, Venkatesh S, Voloudakis G, Justice A, Begoli E, Ramoni R, Tourassi G, Pyarajan S, Tsao PS, O'Donnell CJ, Muralidhar S, Moser J, Casas JP, Bick AG, Zhou W, Cai T, Voight BF, Cho K, Gaziano MJ, Madduri RK, Damrauer SM, Liao KP. Verma A, et al. Among authors: panickan va. medRxiv [Preprint]. 2023 Jun 29:2023.06.28.23291975. doi: 10.1101/2023.06.28.23291975. medRxiv. 2023. PMID: 37425708 Free PMC article. Preprint.
ARCH: Large-scale Knowledge Graph via Aggregated Narrative Codified Health Records Analysis.
Gan Z, Zhou D, Rush E, Panickan VA, Ho YL, Ostrouchov G, Xu Z, Shen S, Xiong X, Greco KF, Hong C, Bonzel CL, Wen J, Costa L, Cai T, Begoli E, Xia Z, Gaziano JM, Liao KP, Cho K, Cai T, Lu J. Gan Z, et al. Among authors: panickan va. medRxiv [Preprint]. 2023 May 21:2023.05.14.23289955. doi: 10.1101/2023.05.14.23289955. medRxiv. 2023. PMID: 37293026 Free PMC article. Preprint.
13 results