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Genome assembly and analysis of Lactuca virosa: implications for lettuce breeding.
Xiong W, van Workum DM, Berke L, Bakker LV, Schijlen E, Becker FFM, van de Geest H, Peters S, Michelmore R, van Treuren R, Jeuken M, Smit S, Schranz ME. Xiong W, et al. Among authors: van workum dm. G3 (Bethesda). 2023 Nov 1;13(11):jkad204. doi: 10.1093/g3journal/jkad204. G3 (Bethesda). 2023. PMID: 37740775 Free PMC article.
PanVA: Pangenomic Variant Analysis.
van den Brandt AVD, Jonkheer EM, van Workum DM, van de Wetering H, Smit S, Vilanova A. van den Brandt AVD, et al. Among authors: van workum dm. IEEE Trans Vis Comput Graph. 2023 Jun 2;PP. doi: 10.1109/TVCG.2023.3282364. Online ahead of print. IEEE Trans Vis Comput Graph. 2023. PMID: 37267130
PanTools v3: functional annotation, classification and phylogenomics.
Jonkheer EM, van Workum DM, Sheikhizadeh Anari S, Brankovics B, de Haan JR, Berke L, van der Lee TAJ, de Ridder D, Smit S. Jonkheer EM, et al. Among authors: van workum dm. Bioinformatics. 2022 Sep 15;38(18):4403-4405. doi: 10.1093/bioinformatics/btac506. Bioinformatics. 2022. PMID: 35861394 Free PMC article.