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Identification of Salmonella Typhimurium Deubiquitinase SseL Substrates by Immunoaffinity Enrichment and Quantitative Proteomic Analysis.
Nakayasu ES, Sydor MA, Brown RN, Sontag RL, Sobreira TJ, Slysz GW, Humphrys DR, Skarina T, Onoprienko O, Di Leo R, Deatherage Kaiser BL, Li J, Ansong C, Cambronne ED, Smith RD, Savchenko A, Adkins JN. Nakayasu ES, et al. J Proteome Res. 2015 Sep 4;14(9):4029-38. doi: 10.1021/acs.jproteome.5b00574. Epub 2015 Aug 6. J Proteome Res. 2015. PMID: 26147956 Free PMC article.
MPLEx: a method for simultaneous pathogen inactivation and extraction of samples for multi-omics profiling.
Burnum-Johnson KE, Kyle JE, Eisfeld AJ, Casey CP, Stratton KG, Gonzalez JF, Habyarimana F, Negretti NM, Sims AC, Chauhan S, Thackray LB, Halfmann PJ, Walters KB, Kim YM, Zink EM, Nicora CD, Weitz KK, Webb-Robertson BM, Nakayasu ES, Ahmer B, Konkel ME, Motin V, Baric RS, Diamond MS, Kawaoka Y, Waters KM, Smith RD, Metz TO. Burnum-Johnson KE, et al. Among authors: nakayasu es. Analyst. 2017 Jan 26;142(3):442-448. doi: 10.1039/c6an02486f. Analyst. 2017. PMID: 28091625 Free PMC article.
Genes essential for phototrophic growth by a purple alphaproteobacterium.
Yang J, Yin L, Lessner FH, Nakayasu ES, Payne SH, Fixen KR, Gallagher L, Harwood CS. Yang J, et al. Among authors: nakayasu es. Environ Microbiol. 2017 Sep;19(9):3567-3578. doi: 10.1111/1462-2920.13852. Epub 2017 Jul 24. Environ Microbiol. 2017. PMID: 28677146
Ancient Regulatory Role of Lysine Acetylation in Central Metabolism.
Nakayasu ES, Burnet MC, Walukiewicz HE, Wilkins CS, Shukla AK, Brooks S, Plutz MJ, Lee BD, Schilling B, Wolfe AJ, Müller S, Kirby JR, Rao CV, Cort JR, Payne SH. Nakayasu ES, et al. mBio. 2017 Nov 28;8(6):e01894-17. doi: 10.1128/mBio.01894-17. mBio. 2017. PMID: 29184018 Free PMC article.
Quality Control Analysis in Real-time (QC-ART): A Tool for Real-time Quality Control Assessment of Mass Spectrometry-based Proteomics Data.
Stanfill BA, Nakayasu ES, Bramer LM, Thompson AM, Ansong CK, Clauss TR, Gritsenko MA, Monroe ME, Moore RJ, Orton DJ, Piehowski PD, Schepmoes AA, Smith RD, Webb-Robertson BM, Metz TO; TEDDY Study Group. Stanfill BA, et al. Among authors: nakayasu es. Mol Cell Proteomics. 2018 Sep;17(9):1824-1836. doi: 10.1074/mcp.RA118.000648. Epub 2018 Apr 17. Mol Cell Proteomics. 2018. PMID: 29666158 Free PMC article.
The MPLEx Protocol for Multi-omic Analyses of Soil Samples.
Nicora CD, Burnum-Johnson KE, Nakayasu ES, Casey CP, White RA 3rd, Roy Chowdhury T, Kyle JE, Kim YM, Smith RD, Metz TO, Jansson JK, Baker ES. Nicora CD, et al. Among authors: nakayasu es. J Vis Exp. 2018 May 30;(135):57343. doi: 10.3791/57343. J Vis Exp. 2018. PMID: 29912205 Free PMC article.
Listeria monocytogenes virulence factors, including listeriolysin O, are secreted in biologically active extracellular vesicles.
Coelho C, Brown L, Maryam M, Vij R, Smith DFQ, Burnet MC, Kyle JE, Heyman HM, Ramirez J, Prados-Rosales R, Lauvau G, Nakayasu ES, Brady NR, Hamacher-Brady A, Coppens I, Casadevall A. Coelho C, et al. Among authors: nakayasu es. J Biol Chem. 2019 Jan 25;294(4):1202-1217. doi: 10.1074/jbc.RA118.006472. Epub 2018 Nov 30. J Biol Chem. 2019. PMID: 30504226 Free PMC article.
148 results