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A chromosome-level, haplotype-phased Vanilla planifolia genome highlights the challenge of partial endoreplication for accurate whole-genome assembly.
Piet Q, Droc G, Marande W, Sarah G, Bocs S, Klopp C, Bourge M, Siljak-Yakovlev S, Bouchez O, Lopez-Roques C, Lepers-Andrzejewski S, Bourgois L, Zucca J, Dron M, Besse P, Grisoni M, Jourda C, Charron C. Piet Q, et al. Among authors: bocs s. Plant Commun. 2022 Sep 12;3(5):100330. doi: 10.1016/j.xplc.2022.100330. Epub 2022 May 5. Plant Commun. 2022. PMID: 35617961 Free PMC article.
Three founding ancestral genomes involved in the origin of sugarcane.
Pompidor N, Charron C, Hervouet C, Bocs S, Droc G, Rivallan R, Manez A, Mitros T, Swaminathan K, Glaszmann JC, Garsmeur O, D'Hont A. Pompidor N, et al. Among authors: bocs s. Ann Bot. 2021 May 7;127(6):827-840. doi: 10.1093/aob/mcab008. Ann Bot. 2021. PMID: 33637991 Free PMC article.
The banana genome hub.
Droc G, Larivière D, Guignon V, Yahiaoui N, This D, Garsmeur O, Dereeper A, Hamelin C, Argout X, Dufayard JF, Lengelle J, Baurens FC, Cenci A, Pitollat B, D'Hont A, Ruiz M, Rouard M, Bocs S. Droc G, et al. Among authors: bocs s. Database (Oxford). 2013 May 23;2013:bat035. doi: 10.1093/database/bat035. Print 2013. Database (Oxford). 2013. PMID: 23707967 Free PMC article.
The coffee genome hub: a resource for coffee genomes.
Dereeper A, Bocs S, Rouard M, Guignon V, Ravel S, Tranchant-Dubreuil C, Poncet V, Garsmeur O, Lashermes P, Droc G. Dereeper A, et al. Among authors: bocs s. Nucleic Acids Res. 2015 Jan;43(Database issue):D1028-35. doi: 10.1093/nar/gku1108. Epub 2014 Nov 11. Nucleic Acids Res. 2015. PMID: 25392413 Free PMC article.
Ten steps to get started in Genome Assembly and Annotation.
Dominguez Del Angel V, Hjerde E, Sterck L, Capella-Gutierrez S, Notredame C, Vinnere Pettersson O, Amselem J, Bouri L, Bocs S, Klopp C, Gibrat JF, Vlasova A, Leskosek BL, Soler L, Binzer-Panchal M, Lantz H. Dominguez Del Angel V, et al. Among authors: bocs s. F1000Res. 2018 Feb 5;7:ELIXIR-148. doi: 10.12688/f1000research.13598.1. eCollection 2018. F1000Res. 2018. PMID: 29568489 Free PMC article.
30 results