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Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic.
Patrono LV, Vrancken B, Budt M, Düx A, Lequime S, Boral S, Gilbert MTP, Gogarten JF, Hoffmann L, Horst D, Merkel K, Morens D, Prepoint B, Schlotterbeck J, Schuenemann VJ, Suchard MA, Taubenberger JK, Tenkhoff L, Urban C, Widulin N, Winter E, Worobey M, Schnalke T, Wolff T, Lemey P, Calvignac-Spencer S. Patrono LV, et al. Among authors: schuenemann vj. Nat Commun. 2022 May 10;13(1):2314. doi: 10.1038/s41467-022-29614-9. Nat Commun. 2022. PMID: 35538057 Free PMC article.
Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis.
Bos KI, Harkins KM, Herbig A, Coscolla M, Weber N, Comas I, Forrest SA, Bryant JM, Harris SR, Schuenemann VJ, Campbell TJ, Majander K, Wilbur AK, Guichon RA, Wolfe Steadman DL, Cook DC, Niemann S, Behr MA, Zumarraga M, Bastida R, Huson D, Nieselt K, Young D, Parkhill J, Buikstra JE, Gagneux S, Stone AC, Krause J. Bos KI, et al. Among authors: schuenemann vj. Nature. 2014 Oct 23;514(7523):494-7. doi: 10.1038/nature13591. Epub 2014 Aug 20. Nature. 2014. PMID: 25141181 Free PMC article.
Tools for opening new chapters in the book of Treponema pallidum evolutionary history.
Gogarten JF, Düx A, Schuenemann VJ, Nowak K, Boesch C, Wittig RM, Krause J, Calvignac-Spencer S, Leendertz FH. Gogarten JF, et al. Among authors: schuenemann vj. Clin Microbiol Infect. 2016 Nov;22(11):916-921. doi: 10.1016/j.cmi.2016.07.027. Epub 2016 Aug 4. Clin Microbiol Infect. 2016. PMID: 27498082 Free article. Review.
A15 Rapid radiation of treponema pallidum pertenue in wild non-human primates.
Düx A, Schuenemann VJ, Gogarten JF, De Nys HM, Nieselt K, Mayhew MA, Leendertz FH, Calvignac-Spencer S, Krause J. Düx A, et al. Among authors: schuenemann vj. Virus Evol. 2017 Mar 5;3(Suppl 1):vew036.014. doi: 10.1093/ve/vew036.014. eCollection 2017 Mar. Virus Evol. 2017. PMID: 28845266 Free PMC article. No abstract available.
Ancient genomes reveal a high diversity of Mycobacterium leprae in medieval Europe.
Schuenemann VJ, Avanzi C, Krause-Kyora B, Seitz A, Herbig A, Inskip S, Bonazzi M, Reiter E, Urban C, Dangvard Pedersen D, Taylor GM, Singh P, Stewart GR, Velemínský P, Likovsky J, Marcsik A, Molnár E, Pálfi G, Mariotti V, Riga A, Belcastro MG, Boldsen JL, Nebel A, Mays S, Donoghue HD, Zakrzewski S, Benjak A, Nieselt K, Cole ST, Krause J. Schuenemann VJ, et al. PLoS Pathog. 2018 May 10;14(5):e1006997. doi: 10.1371/journal.ppat.1006997. eCollection 2018 May. PLoS Pathog. 2018. PMID: 29746563 Free PMC article.
Nonhuman primates across sub-Saharan Africa are infected with the yaws bacterium Treponema pallidum subsp. pertenue.
Knauf S, Gogarten JF, Schuenemann VJ, De Nys HM, Düx A, Strouhal M, Mikalová L, Bos KI, Armstrong R, Batamuzi EK, Chuma IS, Davoust B, Diatta G, Fyumagwa RD, Kazwala RR, Keyyu JD, Lejora IAV, Levasseur A, Liu H, Mayhew MA, Mediannikov O, Raoult D, Wittig RM, Roos C, Leendertz FH, Šmajs D, Nieselt K, Krause J, Calvignac-Spencer S. Knauf S, et al. Among authors: schuenemann vj. Emerg Microbes Infect. 2018 Sep 19;7(1):157. doi: 10.1038/s41426-018-0156-4. Emerg Microbes Infect. 2018. PMID: 30228266 Free PMC article. No abstract available.
Ancient genomes reveal social and genetic structure of Late Neolithic Switzerland.
Furtwängler A, Rohrlach AB, Lamnidis TC, Papac L, Neumann GU, Siebke I, Reiter E, Steuri N, Hald J, Denaire A, Schnitzler B, Wahl J, Ramstein M, Schuenemann VJ, Stockhammer PW, Hafner A, Lösch S, Haak W, Schiffels S, Krause J. Furtwängler A, et al. Among authors: schuenemann vj. Nat Commun. 2020 Apr 20;11(1):1915. doi: 10.1038/s41467-020-15560-x. Nat Commun. 2020. PMID: 32313080 Free PMC article.
2000-year-old pathogen genomes reconstructed from metagenomic analysis of Egyptian mummified individuals.
Neukamm J, Pfrengle S, Molak M, Seitz A, Francken M, Eppenberger P, Avanzi C, Reiter E, Urban C, Welte B, Stockhammer PW, Teßmann B, Herbig A, Harvati K, Nieselt K, Krause J, Schuenemann VJ. Neukamm J, et al. Among authors: schuenemann vj. BMC Biol. 2020 Aug 28;18(1):108. doi: 10.1186/s12915-020-00839-8. BMC Biol. 2020. PMID: 32859198 Free PMC article.
Geographically structured genomic diversity of non-human primate-infecting Treponema pallidum subsp. pertenue.
Mubemba B, Gogarten JF, Schuenemann VJ, Düx A, Lang A, Nowak K, Pléh K, Reiter E, Ulrich M, Agbor A, Brazzola G, Deschner T, Dieguez P, Granjon AC, Jones S, Junker J, Wessling E, Arandjelovic M, Kuehl H, Wittig RM, Leendertz FH, Calvignac-Spencer S. Mubemba B, et al. Among authors: schuenemann vj. Microb Genom. 2020 Nov;6(11):mgen000463. doi: 10.1099/mgen.0.000463. Microb Genom. 2020. PMID: 33125317 Free PMC article.
67 results