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Riverscape genomics of cichlid fishes in the lower Congo: Uncovering mechanisms of diversification in an extreme hydrological regime.
Mol Ecol. 2022 Jul;31(13):3516-3532. doi: 10.1111/mec.16495. Epub 2022 May 22.
Mol Ecol. 2022.
PMID: 35532943
RADcap: sequence capture of dual-digest RADseq libraries with identifiable duplicates and reduced missing data.
Hoffberg SL, Kieran TJ, Catchen JM, Devault A, Faircloth BC, Mauricio R, Glenn TC.
Hoffberg SL, et al.
Mol Ecol Resour. 2016 Sep;16(5):1264-78. doi: 10.1111/1755-0998.12566.
Mol Ecol Resour. 2016.
PMID: 27416967
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Adapterama III: Quadruple-indexed, double/triple-enzyme RADseq libraries (2RAD/3RAD).
Bayona-Vásquez NJ, Glenn TC, Kieran TJ, Pierson TW, Hoffberg SL, Scott PA, Bentley KE, Finger JW, Louha S, Troendle N, Diaz-Jaimes P, Mauricio R, Faircloth BC.
Bayona-Vásquez NJ, et al. Among authors: hoffberg sl.
PeerJ. 2019 Oct 11;7:e7724. doi: 10.7717/peerj.7724. eCollection 2019.
PeerJ. 2019.
PMID: 31616583
Free PMC article.
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Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext).
Glenn TC, Nilsen RA, Kieran TJ, Sanders JG, Bayona-Vásquez NJ, Finger JW, Pierson TW, Bentley KE, Hoffberg SL, Louha S, Garcia-De Leon FJ, Del Rio Portilla MA, Reed KD, Anderson JL, Meece JK, Aggrey SE, Rekaya R, Alabady M, Belanger M, Winker K, Faircloth BC.
Glenn TC, et al. Among authors: hoffberg sl.
PeerJ. 2019 Oct 11;7:e7755. doi: 10.7717/peerj.7755. eCollection 2019.
PeerJ. 2019.
PMID: 31616586
Free PMC article.
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Adapterama II: universal amplicon sequencing on Illumina platforms (TaggiMatrix).
Glenn TC, Pierson TW, Bayona-Vásquez NJ, Kieran TJ, Hoffberg SL, Thomas Iv JC, Lefever DE, Finger JW, Gao B, Bian X, Louha S, Kolli RT, Bentley KE, Rushmore J, Wong K, Shaw TI, Rothrock MJ Jr, McKee AM, Guo TL, Mauricio R, Molina M, Cummings BS, Lash LH, Lu K, Gilbert GS, Hubbell SP, Faircloth BC.
Glenn TC, et al. Among authors: hoffberg sl.
PeerJ. 2019 Oct 11;7:e7786. doi: 10.7717/peerj.7786. eCollection 2019.
PeerJ. 2019.
PMID: 31616589
Free PMC article.
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Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges.
Bentley KE, Berryman KR, Hopper M, Hoffberg SL, Myhre KE, Iwao K, Lee JB, Glenn TC, Mauricio R.
Bentley KE, et al. Among authors: hoffberg sl.
Appl Plant Sci. 2015 Mar 9;3(3):apps.1500002. doi: 10.3732/apps.1500002. eCollection 2015 Mar.
Appl Plant Sci. 2015.
PMID: 25798346
Free PMC article.
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A High-Quality Reference Genome for the Invasive Mosquitofish Gambusia affinis Using a Chicago Library.
Hoffberg SL, Troendle NJ, Glenn TC, Mahmud O, Louha S, Chalopin D, Bennetzen JL, Mauricio R.
Hoffberg SL, et al.
G3 (Bethesda). 2018 May 31;8(6):1855-1861. doi: 10.1534/g3.118.200101.
G3 (Bethesda). 2018.
PMID: 29703783
Free PMC article.
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