Wang C - Search Results

1

Biological aging of CNS-resident cells alters the clinical course and immunopathology of autoimmune demyelinating disease.

Atkinson JR, Jerome AD, Sas AR, Munie A, Wang C, Ma A, Arnold WD, Segal BM. Atkinson JR, et al. Among authors: wang c. JCI Insight. 2022 Jun 22;7(12):e158153. doi: 10.1172/jci.insight.158153. JCI Insight. 2022. PMID: 35511417 Free PMC article.

2

Prediction of regulatory motifs from human Chip-sequencing data using a deep learning framework.

Yang J, Ma A, Hoppe AD, Wang C, Li Y, Zhang C, Wang Y, Liu B, Ma Q. Yang J, et al. Among authors: wang y, wang c. Nucleic Acids Res. 2019 Sep 5;47(15):7809-7824. doi: 10.1093/nar/gkz672. Nucleic Acids Res. 2019. PMID: 31372637 Free PMC article.

3

QUBIC2: a novel and robust biclustering algorithm for analyses and interpretation of large-scale RNA-Seq data.

Xie J, Ma A, Zhang Y, Liu B, Cao S, Wang C, Xu J, Zhang C, Ma Q. Xie J, et al. Among authors: wang c. Bioinformatics. 2020 Feb 15;36(4):1143-1149. doi: 10.1093/bioinformatics/btz692. Bioinformatics. 2020. PMID: 31503285 Free PMC article.

4

IRIS3: integrated cell-type-specific regulon inference server from single-cell RNA-Seq.

Ma A, Wang C, Chang Y, Brennan FH, McDermaid A, Liu B, Zhang C, Popovich PG, Ma Q. Ma A, et al. Among authors: wang c. Nucleic Acids Res. 2020 Jul 2;48(W1):W275-W286. doi: 10.1093/nar/gkaa394. Nucleic Acids Res. 2020. PMID: 32421805 Free PMC article.

5

scGNN is a novel graph neural network framework for single-cell RNA-Seq analyses.

Wang J, Ma A, Chang Y, Gong J, Jiang Y, Qi R, Wang C, Fu H, Ma Q, Xu D. Wang J, et al. Among authors: wang c. Nat Commun. 2021 Mar 25;12(1):1882. doi: 10.1038/s41467-021-22197-x. Nat Commun. 2021. PMID: 33767197 Free PMC article.

6

Author Correction: scGNN is a novel graph neural network framework for single-cell RNA-Seq analyses.

Wang J, Ma A, Chang Y, Gong J, Jiang Y, Qi R, Wang C, Fu H, Ma Q, Xu D. Wang J, et al. Among authors: wang c. Nat Commun. 2022 May 4;13(1):2554. doi: 10.1038/s41467-022-30331-6. Nat Commun. 2022. PMID: 35508488 Free PMC article. No abstract available.

7

DESSO-DB: A web database for sequence and shape motif analyses and identification.

Wang X, Wang C, Li L, Ma Q, Ma A, Liu B. Wang X, et al. Among authors: wang c. Comput Struct Biotechnol J. 2022 Jun 16;20:3053-3058. doi: 10.1016/j.csbj.2022.06.031. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 35782725 Free PMC article.

8

Microglia coordinate cellular interactions during spinal cord repair in mice.

Brennan FH, Li Y, Wang C, Ma A, Guo Q, Li Y, Pukos N, Campbell WA, Witcher KG, Guan Z, Kigerl KA, Hall JCE, Godbout JP, Fischer AJ, McTigue DM, He Z, Ma Q, Popovich PG. Brennan FH, et al. Among authors: wang c. Nat Commun. 2022 Jul 14;13(1):4096. doi: 10.1038/s41467-022-31797-0. Nat Commun. 2022. PMID: 35835751 Free PMC article.

9

Single-cell biological network inference using a heterogeneous graph transformer.

Ma A, Wang X, Li J, Wang C, Xiao T, Liu Y, Cheng H, Wang J, Li Y, Chang Y, Li J, Wang D, Jiang Y, Su L, Xin G, Gu S, Li Z, Liu B, Xu D, Ma Q. Ma A, et al. Among authors: wang x, wang j, wang d, wang c. Nat Commun. 2023 Feb 21;14(1):964. doi: 10.1038/s41467-023-36559-0. Nat Commun. 2023. PMID: 36810839 Free PMC article.

10

A bioinformatics tool for identifying intratumoral microbes from the ORIEN dataset.

Wang C, Ma A, McNutt ME, Hoyd R, Wheeler CE, Robinson LA, Chan CHF, Zakharia Y, Dodd RD, Ulrich CM, Hardikar S, Churchman ML, Tarhini AA, Singer EA, Ikeguchi AP, McCarter MD, Denko N, Tinoco G, Husain M, Jin N, Osman AEG, Eljilany I, Tan AC, Coleman SS 4th, Denko L, Riedlinger G, Schneider BP, Spakowicz D, Ma Q. Wang C, et al. bioRxiv [Preprint]. 2023 May 24:2023.05.24.541982. doi: 10.1101/2023.05.24.541982. bioRxiv. 2023. PMID: 37292990 Free PMC article. Updated. Preprint.

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