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Computer-aided engineering of staphylokinase toward enhanced affinity and selectivity for plasmin.
Nikitin D, Mican J, Toul M, Bednar D, Peskova M, Kittova P, Thalerova S, Vitecek J, Damborsky J, Mikulik R, Fleishman SJ, Prokop Z, Marek M. Nikitin D, et al. Among authors: fleishman sj. Comput Struct Biotechnol J. 2022 Mar 12;20:1366-1377. doi: 10.1016/j.csbj.2022.03.004. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 35386102 Free PMC article.
Optimizing antibody affinity and stability by the automated design of the variable light-heavy chain interfaces.
Warszawski S, Borenstein Katz A, Lipsh R, Khmelnitsky L, Ben Nissan G, Javitt G, Dym O, Unger T, Knop O, Albeck S, Diskin R, Fass D, Sharon M, Fleishman SJ. Warszawski S, et al. Among authors: fleishman sj. PLoS Comput Biol. 2019 Aug 23;15(8):e1007207. doi: 10.1371/journal.pcbi.1007207. eCollection 2019 Aug. PLoS Comput Biol. 2019. PMID: 31442220 Free PMC article.
Editorial overview: Engineering and design.
Fleishman SJ, Mariuzza RA. Fleishman SJ, et al. Curr Opin Struct Biol. 2022 Aug;75:102437. doi: 10.1016/j.sbi.2022.102437. Epub 2022 Jul 21. Curr Opin Struct Biol. 2022. PMID: 35872560 Free PMC article. No abstract available.
One-step sequence and structure-guided optimization of HIV-1 envelope gp140.
Malladi SK, Schreiber D, Pramanick I, Sridevi MA, Goldenzweig A, Dutta S, Fleishman SJ, Varadarajan R. Malladi SK, et al. Among authors: fleishman sj. Curr Res Struct Biol. 2020;2:45-55. doi: 10.1016/j.crstbi.2020.04.001. Epub 2020 Apr 14. Curr Res Struct Biol. 2020. PMID: 33688632 Free PMC article.
What Have We Learned from Design of Function in Large Proteins?
Khersonsky O, Fleishman SJ. Khersonsky O, et al. Among authors: fleishman sj. Biodes Res. 2022 Mar 8;2022:9787581. doi: 10.34133/2022/9787581. eCollection 2022. Biodes Res. 2022. PMID: 37850148 Free PMC article. Review.
Computational design of protein-protein interactions.
Schreiber G, Fleishman SJ. Schreiber G, et al. Among authors: fleishman sj. Curr Opin Struct Biol. 2013 Dec;23(6):903-10. doi: 10.1016/j.sbi.2013.08.003. Epub 2013 Aug 29. Curr Opin Struct Biol. 2013. PMID: 23993666 Review.
130 results