Xie SQ - Search Results

1

Nucleolar-based Dux repression is essential for embryonic two-cell stage exit.

Xie SQ, Leeke BJ, Whilding C, Wagner RT, Garcia-Llagostera F, Low Y, Chammas P, Cheung NT, Dormann D, McManus MT, Percharde M. Xie SQ, et al. Genes Dev. 2022 Mar 1;36(5-6):331-347. doi: 10.1101/gad.349172.121. Epub 2022 Mar 10. Genes Dev. 2022. PMID: 35273077 Free PMC article.

2

Polycomb associates genome-wide with a specific RNA polymerase II variant, and regulates metabolic genes in ESCs.

Brookes E, de Santiago I, Hebenstreit D, Morris KJ, Carroll T, Xie SQ, Stock JK, Heidemann M, Eick D, Nozaki N, Kimura H, Ragoussis J, Teichmann SA, Pombo A. Brookes E, et al. Among authors: xie sq. Cell Stem Cell. 2012 Feb 3;10(2):157-70. doi: 10.1016/j.stem.2011.12.017. Cell Stem Cell. 2012. PMID: 22305566 Free PMC article.

3

Complex multi-enhancer contacts captured by genome architecture mapping.

Beagrie RA, Scialdone A, Schueler M, Kraemer DC, Chotalia M, Xie SQ, Barbieri M, de Santiago I, Lavitas LM, Branco MR, Fraser J, Dostie J, Game L, Dillon N, Edwards PA, Nicodemi M, Pombo A. Beagrie RA, et al. Among authors: xie sq. Nature. 2017 Mar 23;543(7646):519-524. doi: 10.1038/nature21411. Epub 2017 Mar 8. Nature. 2017. PMID: 28273065 Free PMC article.

4

Applying an adaptive watershed to the tissue cell quantification during T-cell migration and embryonic development.

Zhu D, Jarmin S, Ribeiro A, Prin F, Xie SQ, Sullivan K, Briscoe J, Gould AP, Marelli-Berg FM, Gu Y. Zhu D, et al. Among authors: xie sq. Methods Mol Biol. 2010;616:207-28. doi: 10.1007/978-1-60761-461-6_14. Methods Mol Biol. 2010. PMID: 20379878

5

Proteomic analysis of mitotic RNA polymerase II reveals novel interactors and association with proteins dysfunctional in disease.

Möller A, Xie SQ, Hosp F, Lang B, Phatnani HP, James S, Ramirez F, Collin GB, Naggert JK, Babu MM, Greenleaf AL, Selbach M, Pombo A. Möller A, et al. Among authors: xie sq. Mol Cell Proteomics. 2012 Jun;11(6):M111.011767. doi: 10.1074/mcp.M111.011767. Epub 2011 Dec 22. Mol Cell Proteomics. 2012. PMID: 22199231 Free PMC article.

6

Active and poised promoter states drive folding of the extended HoxB locus in mouse embryonic stem cells.

Barbieri M, Xie SQ, Torlai Triglia E, Chiariello AM, Bianco S, de Santiago I, Branco MR, Rueda D, Nicodemi M, Pombo A. Barbieri M, et al. Among authors: xie sq. Nat Struct Mol Biol. 2017 Jun;24(6):515-524. doi: 10.1038/nsmb.3402. Epub 2017 Apr 24. Nat Struct Mol Biol. 2017. PMID: 28436944 Free article.

7

Identification of Two Subsets of Subcompartment A1 Associated with High Transcriptional Activity and Frequent Loop Extrusion.

Yin Z, Cui S, Xue S, Xie Y, Wang Y, Zhao C, Zhang Z, Wu T, Hou G, Wang W, Xie SQ, Wu Y, Guo Y. Yin Z, et al. Among authors: xie sq. Biology (Basel). 2023 Jul 27;12(8):1058. doi: 10.3390/biology12081058. Biology (Basel). 2023. PMID: 37626945 Free PMC article.

8

Splicing speckles are not reservoirs of RNA polymerase II, but contain an inactive form, phosphorylated on serine2 residues of the C-terminal domain.

Xie SQ, Martin S, Guillot PV, Bentley DL, Pombo A. Xie SQ, et al. Mol Biol Cell. 2006 Apr;17(4):1723-33. doi: 10.1091/mbc.e05-08-0726. Epub 2006 Feb 8. Mol Biol Cell. 2006. PMID: 16467386 Free PMC article.

9

CryoFISH: fluorescence in situ hybridization on ultrathin cryosections.

Xie SQ, Lavitas LM, Pombo A. Xie SQ, et al. Methods Mol Biol. 2010;659:219-30. doi: 10.1007/978-1-60761-789-1_15. Methods Mol Biol. 2010. PMID: 20809314

10

Fixation-induced redistribution of hyperphosphorylated RNA polymerase II in the nucleus of human cells.

Guillot PV, Xie SQ, Hollinshead M, Pombo A. Guillot PV, et al. Among authors: xie sq. Exp Cell Res. 2004 May 1;295(2):460-8. doi: 10.1016/j.yexcr.2004.01.020. Exp Cell Res. 2004. PMID: 15093744

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