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Page 1
Gut microbiome dysbiosis during COVID-19 is associated with increased risk for bacteremia and microbial translocation.
Venzon M, Bernard-Raichon L, Klein J, Axelrad JE, Zhang C, Hussey GA, Sullivan AP, Casanovas-Massana A, Noval MG, Valero-Jimenez AM, Gago J, Putzel G, Pironti A, Wilder E; Yale IMPACT Research Team; Thorpe LE, Littman DR, Dittmann M, Stapleford KA, Shopsin B, Torres VJ, Ko AI, Iwasaki A, Cadwell K, Schluter J. Venzon M, et al. Among authors: shopsin b. bioRxiv [Preprint]. 2022 Mar 2:2021.07.15.452246. doi: 10.1101/2021.07.15.452246. bioRxiv. 2022. PMID: 35262080 Free PMC article. Updated. Preprint.
ACE2-containing defensosomes serve as decoys to inhibit SARS-CoV-2 infection.
Ching KL, de Vries M, Gago J, Dancel-Manning K, Sall J, Rice WJ, Barnett C, Liang FX, Thorpe LE, Shopsin B, Segal LN, Dittmann M, Torres VJ, Cadwell K. Ching KL, et al. Among authors: shopsin b. bioRxiv [Preprint]. 2021 Dec 23:2021.12.17.473223. doi: 10.1101/2021.12.17.473223. bioRxiv. 2021. PMID: 34981050 Free PMC article. Updated. Preprint.
Prophage-encoded methyltransferase drives adaptation of community-acquired methicillin-resistant Staphylococcus aureus.
Ulrich RJ, Podkowik M, Tierce R, Irnov I, Putzel G, Samhadaneh N, Lacey KA, Boff D, Morales SM, Makita S, Karagounis TK, Zwack EE, Zhou C, Kim R, Drlica K, Pironti A, van Bakel H, Torres VJ, Shopsin B. Ulrich RJ, et al. Among authors: shopsin b. bioRxiv [Preprint]. 2024 Apr 17:2024.04.17.589803. doi: 10.1101/2024.04.17.589803. bioRxiv. 2024. PMID: 38659881 Free PMC article. Preprint.
Microbiota and metabolic adaptation shape Staphylococcus aureus virulence and antimicrobial resistance during intestinal colonization.
Zhou C, Pawline MB, Pironti A, Morales SM, Perault AI, Ulrich RJ, Podkowik M, Lejeune A, DuMont A, Stubbe FX, Korman A, Jones DR, Schluter J, Richardson AR, Fey PD, Drlica K, Cadwell K, Torres VJ, Shopsin B. Zhou C, et al. Among authors: shopsin b. bioRxiv [Preprint]. 2024 May 11:2024.05.11.593044. doi: 10.1101/2024.05.11.593044. bioRxiv. 2024. PMID: 38766195 Free PMC article. Preprint.
Microbial signatures in the lower airways of mechanically ventilated COVID19 patients associated with poor clinical outcome.
Sulaiman I, Chung M, Angel L, Koralov S, Wu B, Yeung S, Krolikowski K, Li Y, Duerr R, Schluger R, Thannickal S, Koide A, Rafeq S, Barnett C, Postelnicu R, Wang C, Banakis S, Perez-Perez L, Jour G, Shen G, Meyn P, Carpenito J, Liu X, Ji K, Collazo D, Labarbiera A, Amoroso N, Brosnahan S, Mukherjee V, Kaufman D, Bakker J, Lubinsky A, Pradhan D, Sterman D, Heguy A, Uyeki T, Clemente J, de Wit E, Schmidt AM, Shopsin B, Desvignes L, Wang C, Li H, Zhang B, Forst C, Koide S, Stapleford K, Khanna K, Ghedin E, Weiden M, Segal L. Sulaiman I, et al. Among authors: shopsin b. Res Sq [Preprint]. 2021 Mar 29:rs.3.rs-266050. doi: 10.21203/rs.3.rs-266050/v1. Res Sq. 2021. PMID: 33791687 Free PMC article. Updated. Preprint.
SARS-CoV-2 Viral Load in the Nasopharynx at Time of First Infection Among Unvaccinated Individuals: A Secondary Cross-Protocol Analysis of 4 Randomized Trials.
Fisher LH, Kee JJ, Liu A, Espinosa CM, Randhawa AK, Ludwig J, Magaret CA, Robinson ST, Gilbert PB, Hyrien O, Kublin JG, Rouphael N, Falsey AR, Sobieszczyk ME, El Sahly HM, Grinsztejn B, Gray GE, Kotloff KL, Gay CL, Leav B, Hirsch I, Struyf F, Dunkle LM, Neuzil KM, Corey L, Huang Y, Goepfert PA, Walsh SR, Baden LR, Janes H; COVID-19 Prevention Network (CoVPN). Fisher LH, et al. JAMA Netw Open. 2024 May 1;7(5):e2412835. doi: 10.1001/jamanetworkopen.2024.12835. JAMA Netw Open. 2024. PMID: 38780941 Free PMC article.
Quorum-sensing agr system of Staphylococcus aureus primes gene expression for protection from lethal oxidative stress.
Podkowik M, Perault AI, Putzel G, Pountain A, Kim J, DuMont AL, Zwack EE, Ulrich RJ, Karagounis TK, Zhou C, Haag AF, Shenderovich J, Wasserman GA, Kwon J, Chen J, Richardson AR, Weiser JN, Nowosad CR, Lun DS, Parker D, Pironti A, Zhao X, Drlica K, Yanai I, Torres VJ, Shopsin B. Podkowik M, et al. Among authors: shopsin b. Elife. 2024 Apr 30;12:RP89098. doi: 10.7554/eLife.89098. Elife. 2024. PMID: 38687677 Free PMC article.
Transcription-replication interactions reveal bacterial genome regulation.
Pountain AW, Jiang P, Yao T, Homaee E, Guan Y, McDonald KJC, Podkowik M, Shopsin B, Torres VJ, Golding I, Yanai I. Pountain AW, et al. Among authors: shopsin b. Nature. 2024 Feb;626(7999):661-669. doi: 10.1038/s41586-023-06974-w. Epub 2024 Jan 24. Nature. 2024. PMID: 38267581
162 results