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NCBI BLAST+ integrated into Galaxy.
Cock PJ, Chilton JM, Grüning B, Johnson JE, Soranzo N. Cock PJ, et al. Gigascience. 2015 Aug 25;4:39. doi: 10.1186/s13742-015-0080-7. eCollection 2015. Gigascience. 2015. PMID: 26336600 Free PMC article.
BioContainers: an open-source and community-driven framework for software standardization.
da Veiga Leprevost F, Grüning BA, Alves Aflitos S, Röst HL, Uszkoreit J, Barsnes H, Vaudel M, Moreno P, Gatto L, Weber J, Bai M, Jimenez RC, Sachsenberg T, Pfeuffer J, Vera Alvarez R, Griss J, Nesvizhskii AI, Perez-Riverol Y. da Veiga Leprevost F, et al. Among authors: gruning ba. Bioinformatics. 2017 Aug 15;33(16):2580-2582. doi: 10.1093/bioinformatics/btx192. Bioinformatics. 2017. PMID: 28379341 Free PMC article.
ReGaTE: Registration of Galaxy Tools in Elixir.
Doppelt-Azeroual O, Mareuil F, Deveaud E, Kalaš M, Soranzo N, van den Beek M, Grüning B, Ison J, Ménager H. Doppelt-Azeroual O, et al. Gigascience. 2017 Jun 1;6(6):1-4. doi: 10.1093/gigascience/gix022. Gigascience. 2017. PMID: 28402416 Free PMC article.
Software engineering for scientific big data analysis.
Grüning BA, Lampa S, Vaudel M, Blankenberg D. Grüning BA, et al. Gigascience. 2019 May 1;8(5):giz054. doi: 10.1093/gigascience/giz054. Gigascience. 2019. PMID: 31121028 Free PMC article.
Accessible and reproducible mass spectrometry imaging data analysis in Galaxy.
Föll MC, Moritz L, Wollmann T, Stillger MN, Vockert N, Werner M, Bronsert P, Rohr K, Grüning BA, Schilling O. Föll MC, et al. Among authors: gruning ba. Gigascience. 2019 Dec 1;8(12):giz143. doi: 10.1093/gigascience/giz143. Gigascience. 2019. PMID: 31816088 Free PMC article.
113 results