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Functional network analysis reveals an immune tolerance mechanism in cancer.
Mathews JC, Nadeem S, Pouryahya M, Belkhatir Z, Deasy JO, Levine AJ, Tannenbaum AR. Mathews JC, et al. Among authors: pouryahya m. Proc Natl Acad Sci U S A. 2020 Jul 14;117(28):16339-16345. doi: 10.1073/pnas.2002179117. Epub 2020 Jun 29. Proc Natl Acad Sci U S A. 2020. PMID: 32601217 Free PMC article.
Reproducibility of radiomic features using network analysis and its application in Wasserstein k-means clustering.
Oh JH, Apte AP, Katsoulakis E, Riaz N, Hatzoglou V, Yu Y, Mahmood U, Veeraraghavan H, Pouryahya M, Iyer A, Shukla-Dave A, Tannenbaum A, Lee NY, Deasy JO. Oh JH, et al. Among authors: pouryahya m. J Med Imaging (Bellingham). 2021 May;8(3):031904. doi: 10.1117/1.JMI.8.3.031904. Epub 2021 Apr 30. J Med Imaging (Bellingham). 2021. PMID: 33954225 Free PMC article.
AI-based histologic scoring enables automated and reproducible assessment of enrollment criteria and endpoints in NASH clinical trials.
Iyer JS, Pokkalla H, Biddle-Snead C, Carrasco-Zevallos O, Lin M, Shanis Z, Le Q, Juyal D, Pouryahya M, Pedawi A, Hoffman S, Elliott H, Leidal K, Myers RP, Chung C, Billin AN, Watkins TR, Resnick M, Wack K, Glickman J, Burt AD, Loomba R, Sanyal AJ, Montalto MC, Beck AH, Taylor-Weiner A, Wapinski I. Iyer JS, et al. Among authors: pouryahya m. medRxiv [Preprint]. 2023 Apr 25:2023.04.20.23288534. doi: 10.1101/2023.04.20.23288534. medRxiv. 2023. PMID: 37162870 Free PMC article. Preprint.
Integration of deep learning-based histopathology and transcriptomics reveals key genes associated with fibrogenesis in patients with advanced NASH.
Conway J, Pouryahya M, Gindin Y, Pan DZ, Carrasco-Zevallos OM, Mountain V, Subramanian GM, Montalto MC, Resnick M, Beck AH, Huss RS, Myers RP, Taylor-Weiner A, Wapinski I, Chung C. Conway J, et al. Among authors: pouryahya m. Cell Rep Med. 2023 Apr 18;4(4):101016. doi: 10.1016/j.xcrm.2023.101016. Cell Rep Med. 2023. PMID: 37075704 Free PMC article.