Ionita-Laza I - Search Results

1

Whole exome sequencing in Alopecia Areata identifies rare variants in KRT82.

Erjavec SO, Gelfman S, Abdelaziz AR, Lee EY, Monga I, Alkelai A, Ionita-Laza I, Petukhova L, Christiano AM. Erjavec SO, et al. Nat Commun. 2022 Feb 10;13(1):800. doi: 10.1038/s41467-022-28343-3. Nat Commun. 2022. PMID: 35145093 Free PMC article.

2

FUN-LDA: A Latent Dirichlet Allocation Model for Predicting Tissue-Specific Functional Effects of Noncoding Variation: Methods and Applications.

Backenroth D, He Z, Kiryluk K, Boeva V, Pethukova L, Khurana E, Christiano A, Buxbaum JD, Ionita-Laza I. Backenroth D, et al. Am J Hum Genet. 2018 May 3;102(5):920-942. doi: 10.1016/j.ajhg.2018.03.026. Am J Hum Genet. 2018. PMID: 29727691 Free PMC article.

3

A semi-supervised approach for predicting cell-type specific functional consequences of non-coding variation using MPRAs.

He Z, Liu L, Wang K, Ionita-Laza I. He Z, et al. Nat Commun. 2018 Dec 5;9(1):5199. doi: 10.1038/s41467-018-07349-w. Nat Commun. 2018. PMID: 30518757 Free PMC article.

4

A genome-wide scan statistic framework for whole-genome sequence data analysis.

He Z, Xu B, Buxbaum J, Ionita-Laza I. He Z, et al. Nat Commun. 2019 Jul 9;10(1):3018. doi: 10.1038/s41467-019-11023-0. Nat Commun. 2019. PMID: 31289270 Free PMC article.

5

A semi-supervised model to predict regulatory effects of genetic variants at single nucleotide resolution using massively parallel reporter assays.

Yang Z, Wang C, Erjavec S, Petukhova L, Christiano A, Ionita-Laza I. Yang Z, et al. Bioinformatics. 2021 Jan 30;37(14):1953-62. doi: 10.1093/bioinformatics/btab040. Online ahead of print. Bioinformatics. 2021. PMID: 33515242 Free PMC article.

6

Identification of putative causal loci in whole-genome sequencing data via knockoff statistics.

He Z, Liu L, Wang C, Le Guen Y, Lee J, Gogarten S, Lu F, Montgomery S, Tang H, Silverman EK, Cho MH, Greicius M, Ionita-Laza I. He Z, et al. Nat Commun. 2021 May 25;12(1):3152. doi: 10.1038/s41467-021-22889-4. Nat Commun. 2021. PMID: 34035245 Free PMC article.

7

Genetic regulation of serum IgA levels and susceptibility to common immune, infectious, kidney, and cardio-metabolic traits.

Liu L, Khan A, Sanchez-Rodriguez E, Zanoni F, Li Y, Steers N, Balderes O, Zhang J, Krithivasan P, LeDesma RA, Fischman C, Hebbring SJ, Harley JB, Moncrieffe H, Kottyan LC, Namjou-Khales B, Walunas TL, Knevel R, Raychaudhuri S, Karlson EW, Denny JC, Stanaway IB, Crosslin D, Rauen T, Floege J, Eitner F, Moldoveanu Z, Reily C, Knoppova B, Hall S, Sheff JT, Julian BA, Wyatt RJ, Suzuki H, Xie J, Chen N, Zhou X, Zhang H, Hammarström L, Viktorin A, Magnusson PKE, Shang N, Hripcsak G, Weng C, Rundek T, Elkind MSV, Oelsner EC, Barr RG, Ionita-Laza I, Novak J, Gharavi AG, Kiryluk K. Liu L, et al. Nat Commun. 2022 Nov 11;13(1):6859. doi: 10.1038/s41467-022-34456-6. Nat Commun. 2022. PMID: 36369178 Free PMC article.

8

GhostKnockoff inference empowers identification of putative causal variants in genome-wide association studies.

He Z, Liu L, Belloy ME, Le Guen Y, Sossin A, Liu X, Qi X, Ma S, Gyawali PK, Wyss-Coray T, Tang H, Sabatti C, Candès E, Greicius MD, Ionita-Laza I. He Z, et al. Nat Commun. 2022 Nov 23;13(1):7209. doi: 10.1038/s41467-022-34932-z. Nat Commun. 2022. PMID: 36418338 Free PMC article.

9

Returning integrated genomic risk and clinical recommendations: The eMERGE study.

Linder JE, Allworth A, Bland HT, Caraballo PJ, Chisholm RL, Clayton EW, Crosslin DR, Dikilitas O, DiVietro A, Esplin ED, Forman S, Freimuth RR, Gordon AS, Green R, Harden MV, Holm IA, Jarvik GP, Karlson EW, Labrecque S, Lennon NJ, Limdi NA, Mittendorf KF, Murphy SN, Orlando L, Prows CA, Rasmussen LV, Rasmussen-Torvik L, Rowley R, Sawicki KT, Schmidlen T, Terek S, Veenstra D, Velez Edwards DR, Absher D, Abul-Husn NS, Alsip J, Bangash H, Beasley M, Below JE, Berner ES, Booth J, Chung WK, Cimino JJ, Connolly J, Davis P, Devine B, Fullerton SM, Guiducci C, Habrat ML, Hain H, Hakonarson H, Harr M, Haverfield E, Hernandez V, Hoell C, Horike-Pyne M, Hripcsak G, Irvin MR, Kachulis C, Karavite D, Kenny EE, Khan A, Kiryluk K, Korf B, Kottyan L, Kullo IJ, Larkin K, Liu C, Malolepsza E, Manolio TA, May T, McNally EM, Mentch F, Miller A, Mooney SD, Murali P, Mutai B, Muthu N, Namjou B, Perez EF, Puckelwartz MJ, Rakhra-Burris T, Roden DM, Rosenthal EA, Saadatagah S, Sabatello M, Schaid DJ, Schultz B, Seabolt L, Shaibi GQ, Sharp RR, Shirts B, Smith ME, Smoller JW, Sterling R, Suckiel SA, Thayer J, Tiwari HK, Trinidad SB, Walunas T, Wei WQ, Wells QS, Weng C, Wiesner GL, Wiley K; eMERGE Consortium… See abstract for full author list ➔ Linder JE, et al. Genet Med. 2023 Apr;25(4):100006. doi: 10.1016/j.gim.2023.100006. Epub 2023 Jan 6. Genet Med. 2023. PMID: 36621880 Free PMC article.

10

Study designs for identification of rare disease variants in complex diseases: the utility of family-based designs.

Ionita-Laza I, Ottman R. Ionita-Laza I, et al. Genetics. 2011 Nov;189(3):1061-8. doi: 10.1534/genetics.111.131813. Epub 2011 Aug 11. Genetics. 2011. PMID: 21840850 Free PMC article.

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