Yang P - Search Results

1

Functional analysis of the stable phosphoproteome reveals cancer vulnerabilities.

Xiao D, Kim HJ, Pang I, Yang P. Xiao D, et al. Among authors: yang p. Bioinformatics. 2022 Mar 28;38(7):1956-1963. doi: 10.1093/bioinformatics/btac015. Bioinformatics. 2022. PMID: 35015814 Free PMC article.

2

A dynamic wavelet-based algorithm for pre-processing tandem mass spectrometry data.

Wang P, Yang P, Arthur J, Yang JY. Wang P, et al. Among authors: yang p, yang jy. Bioinformatics. 2010 Sep 15;26(18):2242-9. doi: 10.1093/bioinformatics/btq403. Epub 2010 Jul 13. Bioinformatics. 2010. PMID: 20628072

3

OCAP: an open comprehensive analysis pipeline for iTRAQ.

Wang P, Yang P, Yang JY. Wang P, et al. Among authors: yang p, yang jy. Bioinformatics. 2012 May 15;28(10):1404-5. doi: 10.1093/bioinformatics/bts150. Epub 2012 Mar 29. Bioinformatics. 2012. PMID: 22467906

4

Direction pathway analysis of large-scale proteomics data reveals novel features of the insulin action pathway.

Yang P, Patrick E, Tan SX, Fazakerley DJ, Burchfield J, Gribben C, Prior MJ, James DE, Hwa Yang Y. Yang P, et al. Bioinformatics. 2014 Mar 15;30(6):808-14. doi: 10.1093/bioinformatics/btt616. Epub 2013 Oct 27. Bioinformatics. 2014. PMID: 24167158 Free PMC article.

5

Positive-unlabeled ensemble learning for kinase substrate prediction from dynamic phosphoproteomics data.

Yang P, Humphrey SJ, James DE, Yang YH, Jothi R. Yang P, et al. Among authors: yang yh. Bioinformatics. 2016 Jan 15;32(2):252-9. doi: 10.1093/bioinformatics/btv550. Epub 2015 Sep 22. Bioinformatics. 2016. PMID: 26395771 Free PMC article.

6

Integrative analysis identifies co-dependent gene expression regulation of BRG1 and CHD7 at distal regulatory sites in embryonic stem cells.

Yang P, Oldfield A, Kim T, Yang A, Yang JYH, Ho JWK. Yang P, et al. Among authors: yang jyh, yang a. Bioinformatics. 2017 Jul 1;33(13):1916-1920. doi: 10.1093/bioinformatics/btx092. Bioinformatics. 2017. PMID: 28203701 Free PMC article.

7

Transcriptional network dynamics during the progression of pluripotency revealed by integrative statistical learning.

Kim HJ, Osteil P, Humphrey SJ, Cinghu S, Oldfield AJ, Patrick E, Wilkie EE, Peng G, Suo S, Jothi R, Tam PPL, Yang P. Kim HJ, et al. Among authors: yang p. Nucleic Acids Res. 2020 Feb 28;48(4):1828-1842. doi: 10.1093/nar/gkz1179. Nucleic Acids Res. 2020. PMID: 31853542 Free PMC article.

8

scDC: single cell differential composition analysis.

Cao Y, Lin Y, Ormerod JT, Yang P, Yang JYH, Lo KK. Cao Y, et al. Among authors: yang jyh, yang p. BMC Bioinformatics. 2019 Dec 24;20(Suppl 19):721. doi: 10.1186/s12859-019-3211-9. BMC Bioinformatics. 2019. PMID: 31870280 Free PMC article.

9

scReClassify: post hoc cell type classification of single-cell rNA-seq data.

Kim T, Lo K, Geddes TA, Kim HJ, Yang JYH, Yang P. Kim T, et al. Among authors: yang jyh, yang p. BMC Genomics. 2019 Dec 24;20(Suppl 9):913. doi: 10.1186/s12864-019-6305-x. BMC Genomics. 2019. PMID: 31874628 Free PMC article.

10

CiteFuse enables multi-modal analysis of CITE-seq data.

Kim HJ, Lin Y, Geddes TA, Yang JYH, Yang P. Kim HJ, et al. Among authors: yang jyh, yang p. Bioinformatics. 2020 Aug 15;36(14):4137-4143. doi: 10.1093/bioinformatics/btaa282. Bioinformatics. 2020. PMID: 32353146

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