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trfermikit: a tool to discover VNTR-associated deletions.
McHale P, Quinlan AR. McHale P, et al. Among authors: quinlan ar. Bioinformatics. 2022 Feb 7;38(5):1231-1234. doi: 10.1093/bioinformatics/btab805. Bioinformatics. 2022. PMID: 34864893 Free PMC article.
cyvcf2: fast, flexible variant analysis with Python.
Pedersen BS, Quinlan AR. Pedersen BS, et al. Among authors: quinlan ar. Bioinformatics. 2017 Jun 15;33(12):1867-1869. doi: 10.1093/bioinformatics/btx057. Bioinformatics. 2017. PMID: 28165109 Free PMC article.
hts-nim: scripting high-performance genomic analyses.
Pedersen BS, Quinlan AR. Pedersen BS, et al. Among authors: quinlan ar. Bioinformatics. 2018 Oct 1;34(19):3387-3389. doi: 10.1093/bioinformatics/bty358. Bioinformatics. 2018. PMID: 29718142 Free PMC article.
Population-based structural variation discovery with Hydra-Multi.
Lindberg MR, Hall IM, Quinlan AR. Lindberg MR, et al. Among authors: quinlan ar. Bioinformatics. 2015 Apr 15;31(8):1286-9. doi: 10.1093/bioinformatics/btu771. Epub 2014 Dec 2. Bioinformatics. 2015. PMID: 25527832 Free PMC article.
115 results