Sun W - Search Results

1

Coupling high-throughput mapping with proteomics analysis delineates cis-regulatory elements at high resolution.

Wu T, Jiang D, Zou M, Sun W, Wu D, Cui J, Huntress I, Peng X, Li G. Wu T, et al. Among authors: sun w. Nucleic Acids Res. 2022 Jan 11;50(1):e5. doi: 10.1093/nar/gkab890. Nucleic Acids Res. 2022. PMID: 34634809 Free PMC article.

2

A sequential methodology for the rapid identification and characterization of breast cancer-associated functional SNPs.

Zhao Y, Wu D, Jiang D, Zhang X, Wu T, Cui J, Qian M, Zhao J, Oesterreich S, Sun W, Finkel T, Li G. Zhao Y, et al. Among authors: sun w. Nat Commun. 2020 Jul 3;11(1):3340. doi: 10.1038/s41467-020-17159-8. Nat Commun. 2020. PMID: 32620845 Free PMC article.

3

Post-GWAS functional studies reveal an RA-associated CD40-induced NF-kB signal transduction and transcriptional regulation network targeted by class II HDAC inhibitors.

Zou M, Jiang D, Wu T, Zhang X, Zhao Y, Wu D, Sun W, Cui J, Moreland L, Li G. Zou M, et al. Among authors: sun w. Hum Mol Genet. 2021 May 28;30(9):823-835. doi: 10.1093/hmg/ddab032. Hum Mol Genet. 2021. PMID: 33517445 Free PMC article.

4

Improving detection of copy-number variation by simultaneous bias correction and read-depth segmentation.

Szatkiewicz JP, Wang W, Sullivan PF, Wang W, Sun W. Szatkiewicz JP, et al. Among authors: sun w. Nucleic Acids Res. 2013 Feb 1;41(3):1519-32. doi: 10.1093/nar/gks1363. Epub 2012 Dec 28. Nucleic Acids Res. 2013. PMID: 23275535 Free PMC article.

5

Integrated study of copy number states and genotype calls using high-density SNP arrays.

Sun W, Wright FA, Tang Z, Nordgard SH, Van Loo P, Yu T, Kristensen VN, Perou CM. Sun W, et al. Nucleic Acids Res. 2009 Sep;37(16):5365-77. doi: 10.1093/nar/gkp493. Epub 2009 Jul 6. Nucleic Acids Res. 2009. PMID: 19581427 Free PMC article.

6

Allele-specific copy-number discovery from whole-genome and whole-exome sequencing.

Wang W, Wang W, Sun W, Crowley JJ, Szatkiewicz JP. Wang W, et al. Among authors: sun w. Nucleic Acids Res. 2015 Aug 18;43(14):e90. doi: 10.1093/nar/gkv319. Epub 2015 Apr 16. Nucleic Acids Res. 2015. PMID: 25883151 Free PMC article.

7

The association between copy number aberration, DNA methylation and gene expression in tumor samples.

Sun W, Bunn P, Jin C, Little P, Zhabotynsky V, Perou CM, Hayes DN, Chen M, Lin DY. Sun W, et al. Nucleic Acids Res. 2018 Apr 6;46(6):3009-3018. doi: 10.1093/nar/gky131. Nucleic Acids Res. 2018. PMID: 29529299 Free PMC article.

8

Integrated RNA and DNA sequencing improves mutation detection in low purity tumors.

Wilkerson MD, Cabanski CR, Sun W, Hoadley KA, Walter V, Mose LE, Troester MA, Hammerman PS, Parker JS, Perou CM, Hayes DN. Wilkerson MD, et al. Among authors: sun w. Nucleic Acids Res. 2014 Jul;42(13):e107. doi: 10.1093/nar/gku489. Epub 2014 Jun 26. Nucleic Acids Res. 2014. PMID: 24970867 Free PMC article.

9

Proper Use of Allele-Specific Expression Improves Statistical Power for cis-eQTL Mapping with RNA-Seq Data.

Hu YJ, Sun W, Tzeng JY, Perou CM. Hu YJ, et al. Among authors: sun w. J Am Stat Assoc. 2015;110(511):962-974. doi: 10.1080/01621459.2015.1038449. Epub 2015 Nov 7. J Am Stat Assoc. 2015. PMID: 26568645 Free PMC article.

10

Genomewide multiple-loci mapping in experimental crosses by iterative adaptive penalized regression.

Sun W, Ibrahim JG, Zou F. Sun W, et al. Genetics. 2010 May;185(1):349-59. doi: 10.1534/genetics.110.114280. Epub 2010 Feb 15. Genetics. 2010. PMID: 20157003 Free PMC article.

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