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Explainable nucleus classification using Decision Tree Approximation of Learned Embeddings.
Bioinformatics. 2022 Jan 3;38(2):513-519. doi: 10.1093/bioinformatics/btab670.
Bioinformatics. 2022.
PMID: 34586355
Free PMC article.
Interactive Classification of Whole-Slide Imaging Data for Cancer Researchers.
Lee S, Amgad M, Mobadersany P, McCormick M, Pollack BP, Elfandy H, Hussein H, Gutman DA, Cooper LAD.
Lee S, et al. Among authors: mobadersany p.
Cancer Res. 2021 Feb 15;81(4):1171-1177. doi: 10.1158/0008-5472.CAN-20-0668. Epub 2020 Dec 21.
Cancer Res. 2021.
PMID: 33355190
Free PMC article.
Item in Clipboard
NuCLS: A scalable crowdsourcing approach and dataset for nucleus classification and segmentation in breast cancer.
Amgad M, Atteya LA, Hussein H, Mohammed KH, Hafiz E, Elsebaie MAT, Alhusseiny AM, AlMoslemany MA, Elmatboly AM, Pappalardo PA, Sakr RA, Mobadersany P, Rachid A, Saad AM, Alkashash AM, Ruhban IA, Alrefai A, Elgazar NM, Abdulkarim A, Farag AA, Etman A, Elsaeed AG, Alagha Y, Amer YA, Raslan AM, Nadim MK, Elsebaie MAT, Ayad A, Hanna LE, Gadallah A, Elkady M, Drumheller B, Jaye D, Manthey D, Gutman DA, Elfandy H, Cooper LAD.
Amgad M, et al. Among authors: mobadersany p.
Gigascience. 2022 May 17;11:giac037. doi: 10.1093/gigascience/giac037.
Gigascience. 2022.
PMID: 35579553
Free PMC article.
Item in Clipboard
Predicting cancer outcomes from histology and genomics using convolutional networks.
Mobadersany P, Yousefi S, Amgad M, Gutman DA, Barnholtz-Sloan JS, Velázquez Vega JE, Brat DJ, Cooper LAD.
Mobadersany P, et al.
Proc Natl Acad Sci U S A. 2018 Mar 27;115(13):E2970-E2979. doi: 10.1073/pnas.1717139115. Epub 2018 Mar 12.
Proc Natl Acad Sci U S A. 2018.
PMID: 29531073
Free PMC article.
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GestAltNet: aggregation and attention to improve deep learning of gestational age from placental whole-slide images.
Mobadersany P, Cooper LAD, Goldstein JA.
Mobadersany P, et al.
Lab Invest. 2021 Jul;101(7):942-951. doi: 10.1038/s41374-021-00579-5. Epub 2021 Mar 5.
Lab Invest. 2021.
PMID: 33674784
Free PMC article.
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