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Within-host evolutionary dynamics and tissue compartmentalization during acute SARS-CoV-2 infection.
J Virol. 2024 Jan 23;98(1):e0161823. doi: 10.1128/jvi.01618-23. Epub 2024 Jan 4.
J Virol. 2024.
PMID: 38174928
Free article.
When influenza viruses don't play well with others.
Farjo M, Brooke CB.
Farjo M, et al.
Nature. 2023 Apr;616(7958):668-669. doi: 10.1038/d41586-023-00983-5.
Nature. 2023.
PMID: 37019958
No abstract available.
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Low Viral Diversity Limits the Effectiveness of Sequence-Based Transmission Inference for SARS-CoV-2.
Farjo M, Brooke CB.
Farjo M, et al.
mSphere. 2023 Feb 21;8(1):e0054422. doi: 10.1128/msphere.00544-22. Epub 2023 Jan 25.
mSphere. 2023.
PMID: 36695609
Free PMC article.
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Longitudinal Analysis of SARS-CoV-2 Vaccine Breakthrough Infections Reveals Limited Infectious Virus Shedding and Restricted Tissue Distribution.
Ke R, Martinez PP, Smith RL, Gibson LL, Achenbach CJ, McFall S, Qi C, Jacob J, Dembele E, Bundy C, Simons LM, Ozer EA, Hultquist JF, Lorenzo-Redondo R, Opdycke AK, Hawkins C, Murphy RL, Mirza A, Conte M, Gallagher N, Luo CH, Jarrett J, Conte A, Zhou R, Farjo M, Rendon G, Fields CJ, Wang L, Fredrickson R, Baughman ME, Chiu KK, Choi H, Scardina KR, Owens AN, Broach J, Barton B, Lazar P, Robinson ML, Mostafa HH, Manabe YC, Pekosz A, McManus DD, Brooke CB.
Ke R, et al. Among authors: farjo m.
Open Forum Infect Dis. 2022 Apr 13;9(7):ofac192. doi: 10.1093/ofid/ofac192. eCollection 2022 Jul.
Open Forum Infect Dis. 2022.
PMID: 35791353
Free PMC article.
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Daily longitudinal sampling of SARS-CoV-2 infection reveals substantial heterogeneity in infectiousness.
Ke R, Martinez PP, Smith RL, Gibson LL, Mirza A, Conte M, Gallagher N, Luo CH, Jarrett J, Zhou R, Conte A, Liu T, Farjo M, Walden KKO, Rendon G, Fields CJ, Wang L, Fredrickson R, Edmonson DC, Baughman ME, Chiu KK, Choi H, Scardina KR, Bradley S, Gloss SL, Reinhart C, Yedetore J, Quicksall J, Owens AN, Broach J, Barton B, Lazar P, Heetderks WJ, Robinson ML, Mostafa HH, Manabe YC, Pekosz A, McManus DD, Brooke CB.
Ke R, et al. Among authors: farjo m.
Nat Microbiol. 2022 May;7(5):640-652. doi: 10.1038/s41564-022-01105-z. Epub 2022 Apr 28.
Nat Microbiol. 2022.
PMID: 35484231
Free PMC article.
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Longitudinal analysis of SARS-CoV-2 vaccine breakthrough infections reveal limited infectious virus shedding and restricted tissue distribution.
Ke R, Martinez PP, Smith RL, Gibson LL, Achenbach CJ, McFall S, Qi C, Jacob J, Dembele E, Bundy C, Simons LM, Ozer EA, Hultquist JF, Lorenzo-Redondo R, Opdycke AK, Hawkins C, Murphy RL, Mirza A, Conte M, Gallagher N, Luo CH, Jarrett J, Conte A, Zhou R, Farjo M, Rendon G, Fields CJ, Wang L, Fredrickson R, Baughman ME, Chiu KK, Choi H, Scardina KR, Owens AN, Broach J, Barton B, Lazar P, Robinson ML, Mostafa HH, Manabe YC, Pekosz A, McManus DD, Brooke CB.
Ke R, et al. Among authors: farjo m.
medRxiv [Preprint]. 2021 Sep 2:2021.08.30.21262701. doi: 10.1101/2021.08.30.21262701.
medRxiv. 2021.
PMID: 34494028
Free PMC article.
Updated.
Preprint.
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Daily sampling of early SARS-CoV-2 infection reveals substantial heterogeneity in infectiousness.
Ke R, Martinez PP, Smith RL, Gibson LL, Mirza A, Conte M, Gallagher N, Luo CH, Jarrett J, Conte A, Liu T, Farjo M, Walden KKO, Rendon G, Fields CJ, Wang L, Fredrickson R, Edmonson DC, Baughman ME, Chiu KK, Choi H, Scardina KR, Bradley S, Gloss SL, Reinhart C, Yedetore J, Quicksall J, Owens AN, Broach J, Barton B, Lazar P, Heetderks WJ, Robinson ML, Mostafa HH, Manabe YC, Pekosz A, McManus DD, Brooke CB.
Ke R, et al. Among authors: farjo m.
medRxiv [Preprint]. 2021 Jul 12:2021.07.12.21260208. doi: 10.1101/2021.07.12.21260208.
medRxiv. 2021.
PMID: 34282424
Free PMC article.
Updated.
Preprint.
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