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Integration of spatial and single-cell transcriptomic data elucidates mouse organogenesis.
Lohoff T, Ghazanfar S, Missarova A, Koulena N, Pierson N, Griffiths JA, Bardot ES, Eng CL, Tyser RCV, Argelaguet R, Guibentif C, Srinivas S, Briscoe J, Simons BD, Hadjantonakis AK, Göttgens B, Reik W, Nichols J, Cai L, Marioni JC. Lohoff T, et al. Among authors: koulena n. Nat Biotechnol. 2022 Jan;40(1):74-85. doi: 10.1038/s41587-021-01006-2. Epub 2021 Sep 6. Nat Biotechnol. 2022. PMID: 34489600 Free PMC article.
Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH.
Eng CL, Lawson M, Zhu Q, Dries R, Koulena N, Takei Y, Yun J, Cronin C, Karp C, Yuan GC, Cai L. Eng CL, et al. Among authors: koulena n. Nature. 2019 Apr;568(7751):235-239. doi: 10.1038/s41586-019-1049-y. Epub 2019 Mar 25. Nature. 2019. PMID: 30911168 Free PMC article.
Dynamics and Spatial Genomics of the Nascent Transcriptome by Intron seqFISH.
Shah S, Takei Y, Zhou W, Lubeck E, Yun J, Eng CL, Koulena N, Cronin C, Karp C, Liaw EJ, Amin M, Cai L. Shah S, et al. Among authors: koulena n. Cell. 2018 Jul 12;174(2):363-376.e16. doi: 10.1016/j.cell.2018.05.035. Epub 2018 Jun 7. Cell. 2018. PMID: 29887381 Free PMC article.
Multimodal Analysis of Cell Types in a Hypothalamic Node Controlling Social Behavior.
Kim DW, Yao Z, Graybuck LT, Kim TK, Nguyen TN, Smith KA, Fong O, Yi L, Koulena N, Pierson N, Shah S, Lo L, Pool AH, Oka Y, Pachter L, Cai L, Tasic B, Zeng H, Anderson DJ. Kim DW, et al. Among authors: koulena n. Cell. 2019 Oct 17;179(3):713-728.e17. doi: 10.1016/j.cell.2019.09.020. Cell. 2019. PMID: 31626771 Free PMC article.
Imaging cell lineage with a synthetic digital recording system.
Chow KK, Budde MW, Granados AA, Cabrera M, Yoon S, Cho S, Huang TH, Koulena N, Frieda KL, Cai L, Lois C, Elowitz MB. Chow KK, et al. Among authors: koulena n. Science. 2021 Apr 9;372(6538):eabb3099. doi: 10.1126/science.abb3099. Science. 2021. PMID: 33833095