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Environmental vulnerability of the global ocean epipelagic plankton community interactome.
Chaffron S, Delage E, Budinich M, Vintache D, Henry N, Nef C, Ardyna M, Zayed AA, Junger PC, Galand PE, Lovejoy C, Murray AE, Sarmento H; Tara Oceans coordinators; Acinas SG, Babin M, Iudicone D, Jaillon O, Karsenti E, Wincker P, Karp-Boss L, Sullivan MB, Bowler C, de Vargas C, Eveillard D. Chaffron S, et al. Among authors: sarmento h. Sci Adv. 2021 Aug 27;7(35):eabg1921. doi: 10.1126/sciadv.abg1921. Print 2021 Aug. Sci Adv. 2021. PMID: 34452910 Free PMC article.
A holistic approach to marine eco-systems biology.
Karsenti E, Acinas SG, Bork P, Bowler C, De Vargas C, Raes J, Sullivan M, Arendt D, Benzoni F, Claverie JM, Follows M, Gorsky G, Hingamp P, Iudicone D, Jaillon O, Kandels-Lewis S, Krzic U, Not F, Ogata H, Pesant S, Reynaud EG, Sardet C, Sieracki ME, Speich S, Velayoudon D, Weissenbach J, Wincker P; Tara Oceans Consortium. Karsenti E, et al. PLoS Biol. 2011 Oct;9(10):e1001177. doi: 10.1371/journal.pbio.1001177. Epub 2011 Oct 18. PLoS Biol. 2011. PMID: 22028628 Free PMC article.
Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes.
Hingamp P, Grimsley N, Acinas SG, Clerissi C, Subirana L, Poulain J, Ferrera I, Sarmento H, Villar E, Lima-Mendez G, Faust K, Sunagawa S, Claverie JM, Moreau H, Desdevises Y, Bork P, Raes J, de Vargas C, Karsenti E, Kandels-Lewis S, Jaillon O, Not F, Pesant S, Wincker P, Ogata H. Hingamp P, et al. Among authors: sarmento h. ISME J. 2013 Sep;7(9):1678-95. doi: 10.1038/ismej.2013.59. Epub 2013 Apr 11. ISME J. 2013. PMID: 23575371 Free PMC article.
Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities.
Logares R, Sunagawa S, Salazar G, Cornejo-Castillo FM, Ferrera I, Sarmento H, Hingamp P, Ogata H, de Vargas C, Lima-Mendez G, Raes J, Poulain J, Jaillon O, Wincker P, Kandels-Lewis S, Karsenti E, Bork P, Acinas SG. Logares R, et al. Among authors: sarmento h. Environ Microbiol. 2014 Sep;16(9):2659-71. doi: 10.1111/1462-2920.12250. Epub 2013 Sep 18. Environ Microbiol. 2014. PMID: 24102695
Ocean plankton. Structure and function of the global ocean microbiome.
Sunagawa S, Coelho LP, Chaffron S, Kultima JR, Labadie K, Salazar G, Djahanschiri B, Zeller G, Mende DR, Alberti A, Cornejo-Castillo FM, Costea PI, Cruaud C, d'Ovidio F, Engelen S, Ferrera I, Gasol JM, Guidi L, Hildebrand F, Kokoszka F, Lepoivre C, Lima-Mendez G, Poulain J, Poulos BT, Royo-Llonch M, Sarmento H, Vieira-Silva S, Dimier C, Picheral M, Searson S, Kandels-Lewis S; Tara Oceans coordinators; Bowler C, de Vargas C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Jaillon O, Not F, Ogata H, Pesant S, Speich S, Stemmann L, Sullivan MB, Weissenbach J, Wincker P, Karsenti E, Raes J, Acinas SG, Bork P. Sunagawa S, et al. Among authors: sarmento h. Science. 2015 May 22;348(6237):1261359. doi: 10.1126/science.1261359. Science. 2015. PMID: 25999513 Free article.
Global biogeography of the smallest plankton across ocean depths.
Junger PC, Sarmento H, Giner CR, Mestre M, Sebastián M, Morán XAG, Arístegui J, Agustí S, Duarte CM, Acinas SG, Massana R, Gasol JM, Logares R. Junger PC, et al. Among authors: sarmento h. Sci Adv. 2023 Nov 10;9(45):eadg9763. doi: 10.1126/sciadv.adg9763. Epub 2023 Nov 8. Sci Adv. 2023. PMID: 37939185 Free PMC article.
Effects of seasonality, trophic state and landscape properties on CO2 saturation in low-latitude lakes and reservoirs.
Junger PC, Dantas FDCC, Nobre RLG, Kosten S, Venticinque EM, Araújo FC, Sarmento H, Angelini R, Terra I, Gaudêncio A, They NH, Becker V, Cabral CR, Quesado L, Carneiro LS, Caliman A, Amado AM. Junger PC, et al. Among authors: sarmento h. Sci Total Environ. 2019 May 10;664:283-295. doi: 10.1016/j.scitotenv.2019.01.273. Epub 2019 Jan 24. Sci Total Environ. 2019. PMID: 30743122
A georeferenced rRNA amplicon database of aquatic microbiomes from South America.
Metz S, Huber P, Mateus-Barros E, Junger PC, de Melo M, Bagatini IL, Izaguirre I, Câmara Dos Reis M, Llames ME, Accattatis V, Quiroga MV, Devercelli M, Schiaffino MR, Niño-García JP, Bastidas Navarro M, Modenutti B, Vieira H, Saraceno M, Sabio Y García CA, Pereira E, González-Revello A, Piccini C, Unrein F, Alonso C, Sarmento H. Metz S, et al. Among authors: sarmento h. Sci Data. 2022 Sep 13;9(1):565. doi: 10.1038/s41597-022-01665-z. Sci Data. 2022. PMID: 36100598 Free PMC article.
191 results