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Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?
Schilling KG, Rheault F, Petit L, Hansen CB, Nath V, Yeh FC, Girard G, Barakovic M, Rafael-Patino J, Yu T, Fischi-Gomez E, Pizzolato M, Ocampo-Pineda M, Schiavi S, Canales-Rodríguez EJ, Daducci A, Granziera C, Innocenti G, Thiran JP, Mancini L, Wastling S, Cocozza S, Petracca M, Pontillo G, Mancini M, Vos SB, Vakharia VN, Duncan JS, Melero H, Manzanedo L, Sanz-Morales E, Peña-Melián Á, Calamante F, Attyé A, Cabeen RP, Korobova L, Toga AW, Vijayakumari AA, Parker D, Verma R, Radwan A, Sunaert S, Emsell L, De Luca A, Leemans A, Bajada CJ, Haroon H, Azadbakht H, Chamberland M, Genc S, Tax CMW, Yeh PH, Srikanchana R, Mcknight CD, Yang JY, Chen J, Kelly CE, Yeh CH, Cochereau J, Maller JJ, Welton T, Almairac F, Seunarine KK, Clark CA, Zhang F, Makris N, Golby A, Rathi Y, O'Donnell LJ, Xia Y, Aydogan DB, Shi Y, Fernandes FG, Raemaekers M, Warrington S, Michielse S, Ramírez-Manzanares A, Concha L, Aranda R, Meraz MR, Lerma-Usabiaga G, Roitman L, Fekonja LS, Calarco N, Joseph M, Nakua H, Voineskos AN, Karan P, Grenier G, Legarreta JH, Adluru N, Nair VA, Prabhakaran V, Alexander AL, Kamagata K, Saito Y, Uchida W, Andica C, Abe M, Bayrak RG, Wheeler-Kingshott CAMG, D'Angelo E, Palesi F, Savi… See abstract for full author list ➔ Schilling KG, et al. Among authors: chandio bq. Neuroimage. 2021 Nov;243:118502. doi: 10.1016/j.neuroimage.2021.118502. Epub 2021 Aug 22. Neuroimage. 2021. PMID: 34433094 Free PMC article.
Pandora: 4-D White Matter Bundle Population-Based Atlases Derived from Diffusion MRI Fiber Tractography.
Hansen CB, Yang Q, Lyu I, Rheault F, Kerley C, Chandio BQ, Fadnavis S, Williams O, Shafer AT, Resnick SM, Zald DH, Cutting LE, Taylor WD, Boyd B, Garyfallidis E, Anderson AW, Descoteaux M, Landman BA, Schilling KG. Hansen CB, et al. Among authors: chandio bq. Neuroinformatics. 2021 Jul;19(3):447-460. doi: 10.1007/s12021-020-09497-1. Epub 2020 Nov 16. Neuroinformatics. 2021. PMID: 33196967 Free PMC article.
Learning white matter subject-specific segmentation from structural MRI.
Yang Q, Hansen CB, Cai LY, Rheault F, Lee HH, Bao S, Chandio BQ, Williams O, Resnick SM, Garyfallidis E, Anderson AW, Descoteaux M, Schilling KG, Landman BA. Yang Q, et al. Among authors: chandio bq. Med Phys. 2022 Apr;49(4):2502-2513. doi: 10.1002/mp.15495. Epub 2022 Feb 7. Med Phys. 2022. PMID: 35090192 Free PMC article.
FiberNeat: Unsupervised White Matter Tract Filtering.
Chandio BQ, Chattopadhyay T, Owens-Walton C, Reina JEV, Nabulsi L, Thomopoulos SI, Garyfallidis E, Thompson PM. Chandio BQ, et al. Annu Int Conf IEEE Eng Med Biol Soc. 2022 Jul;2022:5055-5061. doi: 10.1109/EMBC48229.2022.9870877. Annu Int Conf IEEE Eng Med Biol Soc. 2022. PMID: 36085780
Evaluating the Reliability of Human Brain White Matter Tractometry.
Kruper J, Yeatman JD, Richie-Halford A, Bloom D, Grotheer M, Caffarra S, Kiar G, Karipidis II, Roy E, Chandio BQ, Garyfallidis E, Rokem A. Kruper J, et al. Among authors: chandio bq. Apert Neuro. 2021;1(1):10.52294/e6198273-b8e3-4b63-babb-6e6b0da10669. doi: 10.52294/e6198273-b8e3-4b63-babb-6e6b0da10669. Epub 2021 Nov 17. Apert Neuro. 2021. PMID: 35079748 Free PMC article.
Brainhack: Developing a culture of open, inclusive, community-driven neuroscience.
Gau R, Noble S, Heuer K, Bottenhorn KL, Bilgin IP, Yang YF, Huntenburg JM, Bayer JMM, Bethlehem RAI, Rhoads SA, Vogelbacher C, Borghesani V, Levitis E, Wang HT, Van Den Bossche S, Kobeleva X, Legarreta JH, Guay S, Atay SM, Varoquaux GP, Huijser DC, Sandström MS, Herholz P, Nastase SA, Badhwar A, Dumas G, Schwab S, Moia S, Dayan M, Bassil Y, Brooks PP, Mancini M, Shine JM, O'Connor D, Xie X, Poggiali D, Friedrich P, Heinsfeld AS, Riedl L, Toro R, Caballero-Gaudes C, Eklund A, Garner KG, Nolan CR, Demeter DV, Barrios FA, Merchant JS, McDevitt EA, Oostenveld R, Craddock RC, Rokem A, Doyle A, Ghosh SS, Nikolaidis A, Stanley OW, Uruñuela E; Brainhack Community. Gau R, et al. Neuron. 2021 Jun 2;109(11):1769-1775. doi: 10.1016/j.neuron.2021.04.001. Epub 2021 Apr 30. Neuron. 2021. PMID: 33932337 Free PMC article.
Microstructural Mapping of Neural Pathways in Alzheimer's Disease using Macrostructure-Informed Normative Tractometry.
Feng Y, Chandio BQ, Villalon-Reina JE, Thomopoulos SI, Nir TM, Benavidez S, Laltoo E, Chattopadhyay T, Joshi H, Venkatasubramanian G, John JP, Jahanshad N, Reid RI, Jack CR, Weiner MW, Thompson PM; Alzheimers Disease Neuroimaging Initiative. Feng Y, et al. Among authors: chandio bq. bioRxiv [Preprint]. 2024 Apr 28:2024.04.25.591183. doi: 10.1101/2024.04.25.591183. bioRxiv. 2024. PMID: 38712293 Free PMC article. Preprint.
Deep Normative Tractometry for Identifying Joint White Matter Macro- and Micro-structural Abnormalities in Alzheimer's Disease.
Feng Y, Chandio BQ, Villalon-Reina JE, Benavidez S, Chattopadhyay T, Chehrzadeh S, Laltoo E, Thomopoulos SI, Joshi H, Venkatasubramanian G, John JP, Jahanshad N, Thompson PM. Feng Y, et al. Among authors: chandio bq. bioRxiv [Preprint]. 2024 Feb 6:2024.02.05.578943. doi: 10.1101/2024.02.05.578943. bioRxiv. 2024. PMID: 38370817 Free PMC article. Preprint.
17 results