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Selective Inhibition of JAK1 Primes STAT5-Driven Human Leukemia Cells for ATRA-Induced Differentiation.
Ramsey HE, Stengel K, Pino JC, Johnston G, Childress M, Gorska AE, Arrate PM, Fuller L, Villaume M, Fischer MA, Ferrell PB Jr, Roe CE, Zou J, Lubbock ALR, Stubbs M, Zinkel S, Irish JM, Lopez CF, Hiebert S, Savona MR. Ramsey HE, et al. Among authors: lopez cf. Target Oncol. 2021 Sep;16(5):663-674. doi: 10.1007/s11523-021-00830-5. Epub 2021 Jul 29. Target Oncol. 2021. PMID: 34324169 Free PMC article.
GPU-powered model analysis with PySB/cupSODA.
Harris LA, Nobile MS, Pino JC, Lubbock ALR, Besozzi D, Mauri G, Cazzaniga P, Lopez CF. Harris LA, et al. Among authors: lopez cf. Bioinformatics. 2017 Nov 1;33(21):3492-3494. doi: 10.1093/bioinformatics/btx420. Bioinformatics. 2017. PMID: 28666314 Free PMC article.
ACDC: Automated Cell Detection and Counting for Time-Lapse Fluorescence Microscopy.
Rundo L, Tangherloni A, Tyson DR, Betta R, Militello C, Spolaor S, Nobile MS, Besozzi D, Lubbock ALR, Quaranta V, Mauri G, Lopez CF, Cazzaniga P. Rundo L, et al. Among authors: lopez cf. Appl Sci (Basel). 2020 Sep 2;10(18):6187. doi: 10.3390/app10186187. Epub 2020 Sep 6. Appl Sci (Basel). 2020. PMID: 34306736 Free PMC article.
Programmatic modeling for biological systems.
Lubbock ALR, Lopez CF. Lubbock ALR, et al. Among authors: lopez cf. Curr Opin Syst Biol. 2021 Sep;27:100343. doi: 10.1016/j.coisb.2021.05.004. Epub 2021 May 24. Curr Opin Syst Biol. 2021. PMID: 34485764 Free PMC article.
Processes in DNA damage response from a whole-cell multi-omics perspective.
Pino JC, Lubbock ALR, Harris LA, Gutierrez DB, Farrow MA, Muszynski N, Tsui T, Sherrod SD, Norris JL, McLean JA, Caprioli RM, Wikswo JP, Lopez CF. Pino JC, et al. Among authors: lopez cf. iScience. 2022 Oct 19;25(11):105341. doi: 10.1016/j.isci.2022.105341. eCollection 2022 Nov 18. iScience. 2022. PMID: 36339253 Free PMC article.
Integrated Multi-omics Analysis of Early Lung Adenocarcinoma Links Tumor Biological Features with Predicted Indolence or Aggressiveness.
Senosain MF, Zou Y, Patel K, Zhao S, Coullomb A, Rowe DJ, Lehman JM, Irish JM, Maldonado F, Kammer MN, Pancaldi V, Lopez CF. Senosain MF, et al. Among authors: lopez cf. Cancer Res Commun. 2023 Jul 26;3(7):1350-1365. doi: 10.1158/2767-9764.CRC-22-0373. eCollection 2023 Jul. Cancer Res Commun. 2023. PMID: 37501683 Free PMC article.
52 results