van Hijum SAFT - Search Results

1

Natural variation in wild tomato trichomes; selecting metabolites that contribute to insect resistance using a random forest approach.

Kortbeek RWJ, Galland MD, Muras A, van der Kloet FM, André B, Heilijgers M, van Hijum SAFT, Haring MA, Schuurink RC, Bleeker PM. Kortbeek RWJ, et al. Among authors: van hijum saft. BMC Plant Biol. 2021 Jul 2;21(1):315. doi: 10.1186/s12870-021-03070-x. BMC Plant Biol. 2021. PMID: 34215189 Free PMC article.

2

Genotype-phenotype matching analysis of 38 Lactococcus lactis strains using random forest methods.

Bayjanov JR, Starrenburg MJ, van der Sijde MR, Siezen RJ, van Hijum SA. Bayjanov JR, et al. BMC Microbiol. 2013 Mar 26;13:68. doi: 10.1186/1471-2180-13-68. BMC Microbiol. 2013. PMID: 23530958 Free PMC article.

3

PhenoLink--a web-tool for linking phenotype to ~omics data for bacteria: application to gene-trait matching for Lactobacillus plantarum strains.

Bayjanov JR, Molenaar D, Tzeneva V, Siezen RJ, van Hijum SA. Bayjanov JR, et al. BMC Genomics. 2012 May 4;13:170. doi: 10.1186/1471-2164-13-170. BMC Genomics. 2012. PMID: 22559291 Free PMC article.

4

A predicted physicochemically distinct sub-proteome associated with the intracellular organelle of the anammox bacterium Kuenenia stuttgartiensis.

Medema MH, Zhou M, van Hijum SA, Gloerich J, Wessels HJ, Siezen RJ, Strous M. Medema MH, et al. BMC Genomics. 2010 May 12;11:299. doi: 10.1186/1471-2164-11-299. BMC Genomics. 2010. PMID: 20459862 Free PMC article.

5

Data mining in the Life Sciences with Random Forest: a walk in the park or lost in the jungle?

Touw WG, Bayjanov JR, Overmars L, Backus L, Boekhorst J, Wels M, van Hijum SA. Touw WG, et al. Brief Bioinform. 2013 May;14(3):315-26. doi: 10.1093/bib/bbs034. Epub 2012 Jul 10. Brief Bioinform. 2013. PMID: 22786785 Free PMC article.

6

The Contribution of Genetic Variation of Streptococcus pneumoniae to the Clinical Manifestation of Invasive Pneumococcal Disease.

Cremers AJH, Mobegi FM, van der Gaast-de Jongh C, van Weert M, van Opzeeland FJ, Vehkala M, Knol MJ, Bootsma HJ, Välimäki N, Croucher NJ, Meis JF, Bentley S, van Hijum SAFT, Corander J, Zomer AL, Ferwerda G, de Jonge MI. Cremers AJH, et al. Among authors: van weert m, van opzeeland fj, van der gaast de jongh c, van hijum saft. Clin Infect Dis. 2019 Jan 1;68(1):61-69. doi: 10.1093/cid/ciy417. Clin Infect Dis. 2019. PMID: 29788414

7

Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes.

Gori F, Tringe SG, Folino G, van Hijum SA, Op den Camp HJ, Jetten MS, Marchiori E. Gori F, et al. BMC Genomics. 2013 Jan 16;14:7. doi: 10.1186/1471-2164-14-7. BMC Genomics. 2013. PMID: 23324532 Free PMC article.

8

PanCGHweb: a web tool for genotype calling in pangenome CGH data.

Bayjanov JR, Siezen RJ, van Hijum SA. Bayjanov JR, et al. Bioinformatics. 2010 May 1;26(9):1256-7. doi: 10.1093/bioinformatics/btq103. Epub 2010 Mar 10. Bioinformatics. 2010. PMID: 20219865 Free PMC article.

9

Fermentation-induced variation in heat and oxidative stress phenotypes of Lactococcus lactis MG1363 reveals transcriptome signatures for robustness.

Dijkstra AR, Alkema W, Starrenburg MJ, Hugenholtz J, van Hijum SA, Bron PA. Dijkstra AR, et al. Microb Cell Fact. 2014 Nov 4;13:148. doi: 10.1186/s12934-014-0148-6. Microb Cell Fact. 2014. PMID: 25366036 Free PMC article.

10

Strain-Dependent Transcriptome Signatures for Robustness in Lactococcus lactis.

Dijkstra AR, Alkema W, Starrenburg MJ, Hugenholtz J, van Hijum SA, Bron PA. Dijkstra AR, et al. PLoS One. 2016 Dec 14;11(12):e0167944. doi: 10.1371/journal.pone.0167944. eCollection 2016. PLoS One. 2016. PMID: 27973578 Free PMC article.

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