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Benchmarked approaches for reconstruction of in vitro cell lineages and in silico models of C. elegans and M. musculus developmental trees.
Gong W, Granados AA, Hu J, Jones MG, Raz O, Salvador-Martínez I, Zhang H, Chow KK, Kwak IY, Retkute R, Prusokiene A, Prusokas A, Khodaverdian A, Zhang R, Rao S, Wang R, Rennert P, Saipradeep VG, Sivadasan N, Rao A, Joseph T, Srinivasan R, Peng J, Han L, Shang X, Garry DJ, Yu T, Chung V, Mason M, Liu Z, Guan Y, Yosef N, Shendure J, Telford MJ, Shapiro E, Elowitz MB, Meyer P. Gong W, et al. Among authors: yosef n. Cell Syst. 2021 Aug 18;12(8):810-826.e4. doi: 10.1016/j.cels.2021.05.008. Epub 2021 Jun 18. Cell Syst. 2021. PMID: 34146472 Free article.
Sodium perturbs mitochondrial respiration and induces dysfunctional Tregs.
Côrte-Real BF, Hamad I, Arroyo Hornero R, Geisberger S, Roels J, Van Zeebroeck L, Dyczko A, van Gisbergen MW, Kurniawan H, Wagner A, Yosef N, Weiss SNY, Schmetterer KG, Schröder A, Krampert L, Haase S, Bartolomaeus H, Hellings N, Saeys Y, Dubois LJ, Brenner D, Kempa S, Hafler DA, Stegbauer J, Linker RA, Jantsch J, Müller DN, Kleinewietfeld M. Côrte-Real BF, et al. Among authors: yosef n. Cell Metab. 2023 Feb 7;35(2):299-315.e8. doi: 10.1016/j.cmet.2023.01.009. Cell Metab. 2023. PMID: 36754020 Free article.
Connectivity problems on heterogeneous graphs.
Wu J, Khodaverdian A, Weitz B, Yosef N. Wu J, et al. Among authors: yosef n. Algorithms Mol Biol. 2019 Mar 8;14:5. doi: 10.1186/s13015-019-0141-z. eCollection 2019. Algorithms Mol Biol. 2019. PMID: 30899321 Free PMC article.
Molecular recording of mammalian embryogenesis.
Chan MM, Smith ZD, Grosswendt S, Kretzmer H, Norman TM, Adamson B, Jost M, Quinn JJ, Yang D, Jones MG, Khodaverdian A, Yosef N, Meissner A, Weissman JS. Chan MM, et al. Among authors: yosef n. Nature. 2019 Jun;570(7759):77-82. doi: 10.1038/s41586-019-1184-5. Epub 2019 May 13. Nature. 2019. PMID: 31086336 Free PMC article.
Functional interpretation of single cell similarity maps.
DeTomaso D, Jones MG, Subramaniam M, Ashuach T, Ye CJ, Yosef N. DeTomaso D, et al. Among authors: yosef n. Nat Commun. 2019 Sep 26;10(1):4376. doi: 10.1038/s41467-019-12235-0. Nat Commun. 2019. PMID: 31558714 Free PMC article.
193 results