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Benchmarked approaches for reconstruction of in vitro cell lineages and in silico models of C. elegans and M. musculus developmental trees.
Gong W, Granados AA, Hu J, Jones MG, Raz O, Salvador-Martínez I, Zhang H, Chow KK, Kwak IY, Retkute R, Prusokiene A, Prusokas A, Khodaverdian A, Zhang R, Rao S, Wang R, Rennert P, Saipradeep VG, Sivadasan N, Rao A, Joseph T, Srinivasan R, Peng J, Han L, Shang X, Garry DJ, Yu T, Chung V, Mason M, Liu Z, Guan Y, Yosef N, Shendure J, Telford MJ, Shapiro E, Elowitz MB, Meyer P. Gong W, et al. Among authors: retkute r. Cell Syst. 2021 Aug 18;12(8):810-826.e4. doi: 10.1016/j.cels.2021.05.008. Epub 2021 Jun 18. Cell Syst. 2021. PMID: 34146472 Free article.
Effectiveness of glass beads for plating cell cultures.
Prusokas A, Hawkins M, Nieduszynski CA, Retkute R. Prusokas A, et al. Among authors: retkute r. Phys Rev E. 2021 May;103(5-1):052410. doi: 10.1103/PhysRevE.103.052410. Phys Rev E. 2021. PMID: 34134194 Free article.
Mathematical modelling of whole chromosome replication.
de Moura AP, Retkute R, Hawkins M, Nieduszynski CA. de Moura AP, et al. Among authors: retkute r. Nucleic Acids Res. 2010 Sep;38(17):5623-33. doi: 10.1093/nar/gkq343. Epub 2010 May 10. Nucleic Acids Res. 2010. PMID: 20457753 Free PMC article.
Dynamics of DNA replication in yeast.
Retkute R, Nieduszynski CA, de Moura A. Retkute R, et al. Phys Rev Lett. 2011 Aug 5;107(6):068103. doi: 10.1103/PhysRevLett.107.068103. Epub 2011 Aug 4. Phys Rev Lett. 2011. PMID: 21902372 Free PMC article.
Mathematical modeling of genome replication.
Retkute R, Nieduszynski CA, de Moura A. Retkute R, et al. Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Sep;86(3 Pt 1):031916. doi: 10.1103/PhysRevE.86.031916. Epub 2012 Sep 17. Phys Rev E Stat Nonlin Soft Matter Phys. 2012. PMID: 23030953 Free PMC article.
The dynamics of genome replication using deep sequencing.
Müller CA, Hawkins M, Retkute R, Malla S, Wilson R, Blythe MJ, Nakato R, Komata M, Shirahige K, de Moura AP, Nieduszynski CA. Müller CA, et al. Among authors: retkute r. Nucleic Acids Res. 2014 Jan;42(1):e3. doi: 10.1093/nar/gkt878. Epub 2013 Oct 1. Nucleic Acids Res. 2014. PMID: 24089142 Free PMC article.
32 results