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When outgroups fail; phylogenomics of rooting the emerging pathogen, Coxiella burnetii.
Pearson T, Hornstra HM, Sahl JW, Schaack S, Schupp JM, Beckstrom-Sternberg SM, O'Neill MW, Priestley RA, Champion MD, Beckstrom-Sternberg JS, Kersh GJ, Samuel JE, Massung RF, Keim P. Pearson T, et al. Among authors: sahl jw. Syst Biol. 2013 Sep;62(5):752-62. doi: 10.1093/sysbio/syt038. Epub 2013 Jun 4. Syst Biol. 2013. PMID: 23736103 Free PMC article.
Yersinia pestis and the plague of Justinian 541-543 AD: a genomic analysis.
Wagner DM, Klunk J, Harbeck M, Devault A, Waglechner N, Sahl JW, Enk J, Birdsell DN, Kuch M, Lumibao C, Poinar D, Pearson T, Fourment M, Golding B, Riehm JM, Earn DJ, Dewitte S, Rouillard JM, Grupe G, Wiechmann I, Bliska JB, Keim PS, Scholz HC, Holmes EC, Poinar H. Wagner DM, et al. Among authors: sahl jw. Lancet Infect Dis. 2014 Apr;14(4):319-26. doi: 10.1016/S1473-3099(13)70323-2. Epub 2014 Jan 28. Lancet Infect Dis. 2014. PMID: 24480148
Genome Sequence of Bacillus anthracis STI, a Sterne-Like Georgian/Soviet Vaccine Strain.
Okinaka RT, Challacombe J, Drees K, Birdsell DN, Janke N, Naumann A, Seymour M, Hornstra H, Schupp J, Sahl J, Foster JT, Pearson T, Turnbull P, Keim P. Okinaka RT, et al. Among authors: sahl j. Genome Announc. 2014 Sep 18;2(5):e00853-14. doi: 10.1128/genomeA.00853-14. Genome Announc. 2014. PMID: 25237016 Free PMC article.
Defining the phylogenomics of Shigella species: a pathway to diagnostics.
Sahl JW, Morris CR, Emberger J, Fraser CM, Ochieng JB, Juma J, Fields B, Breiman RF, Gilmour M, Nataro JP, Rasko DA. Sahl JW, et al. J Clin Microbiol. 2015 Mar;53(3):951-60. doi: 10.1128/JCM.03527-14. Epub 2015 Jan 14. J Clin Microbiol. 2015. PMID: 25588655 Free PMC article.
Whole Genome Analysis of Injectional Anthrax Identifies Two Disease Clusters Spanning More Than 13 Years.
Keim P, Grunow R, Vipond R, Grass G, Hoffmaster A, Birdsell DN, Klee SR, Pullan S, Antwerpen M, Bayer BN, Latham J, Wiggins K, Hepp C, Pearson T, Brooks T, Sahl J, Wagner DM. Keim P, et al. Among authors: sahl j. EBioMedicine. 2015 Oct 6;2(11):1613-8. doi: 10.1016/j.ebiom.2015.10.004. eCollection 2015 Nov. EBioMedicine. 2015. PMID: 26870786 Free PMC article.
Draft Genome Sequence of the First Pathogenic Leptospira Isolates from Ecuador.
Barragan V, Sahl JW, Wiggins K, Chiriboga J, Salinas A, Cantos NE, Loor MN, Intriago BI, Morales M, Trueba G, Pearson T. Barragan V, et al. Among authors: sahl jw. Genome Announc. 2016 May 5;4(3):e00271-16. doi: 10.1128/genomeA.00271-16. Genome Announc. 2016. PMID: 27151788 Free PMC article.
The Effects of Signal Erosion and Core Genome Reduction on the Identification of Diagnostic Markers.
Sahl JW, Vazquez AJ, Hall CM, Busch JD, Tuanyok A, Mayo M, Schupp JM, Lummis M, Pearson T, Shippy K, Colman RE, Allender CJ, Theobald V, Sarovich DS, Price EP, Hutcheson A, Korlach J, LiPuma JJ, Ladner J, Lovett S, Koroleva G, Palacios G, Limmathurotsakul D, Wuthiekanun V, Wongsuwan G, Currie BJ, Keim P, Wagner DM. Sahl JW, et al. mBio. 2016 Sep 20;7(5):e00846-16. doi: 10.1128/mBio.00846-16. mBio. 2016. PMID: 27651357 Free PMC article.
162 results