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Transcription factor DUO1 generated by neo-functionalization is associated with evolution of sperm differentiation in plants.
Higo A, Kawashima T, Borg M, Zhao M, López-Vidriero I, Sakayama H, Montgomery SA, Sekimoto H, Hackenberg D, Shimamura M, Nishiyama T, Sakakibara K, Tomita Y, Togawa T, Kunimoto K, Osakabe A, Suzuki Y, Yamato KT, Ishizaki K, Nishihama R, Kohchi T, Franco-Zorrilla JM, Twell D, Berger F, Araki T. Higo A, et al. Among authors: nishiyama t. Nat Commun. 2018 Dec 11;9(1):5283. doi: 10.1038/s41467-018-07728-3. Nat Commun. 2018. PMID: 30538242 Free PMC article.
Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts.
Li FW, Nishiyama T, Waller M, Frangedakis E, Keller J, Li Z, Fernandez-Pozo N, Barker MS, Bennett T, Blázquez MA, Cheng S, Cuming AC, de Vries J, de Vries S, Delaux PM, Diop IS, Harrison CJ, Hauser D, Hernández-García J, Kirbis A, Meeks JC, Monte I, Mutte SK, Neubauer A, Quandt D, Robison T, Shimamura M, Rensing SA, Villarreal JC, Weijers D, Wicke S, Wong GK, Sakakibara K, Szövényi P. Li FW, et al. Among authors: nishiyama t. Nat Plants. 2020 Mar;6(3):259-272. doi: 10.1038/s41477-020-0618-2. Epub 2020 Mar 13. Nat Plants. 2020. PMID: 32170292 Free PMC article.
The complete plastid genome sequence of the enigmatic moss, Takakia lepidozioides (Takakiopsida, Bryophyta): evolutionary perspectives on the largest collection of genes in mosses and the intensive RNA editing.
Sadamitsu A, Inoue Y, Sakakibara K, Tsubota H, Yamaguchi T, Deguchi H, Nishiyama T, Shimamura M. Sadamitsu A, et al. Among authors: nishiyama t. Plant Mol Biol. 2021 Nov;107(4-5):431-449. doi: 10.1007/s11103-021-01214-z. Epub 2021 Nov 24. Plant Mol Biol. 2021. PMID: 34817767
The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants.
Rensing SA, Lang D, Zimmer AD, Terry A, Salamov A, Shapiro H, Nishiyama T, Perroud PF, Lindquist EA, Kamisugi Y, Tanahashi T, Sakakibara K, Fujita T, Oishi K, Shin-I T, Kuroki Y, Toyoda A, Suzuki Y, Hashimoto S, Yamaguchi K, Sugano S, Kohara Y, Fujiyama A, Anterola A, Aoki S, Ashton N, Barbazuk WB, Barker E, Bennetzen JL, Blankenship R, Cho SH, Dutcher SK, Estelle M, Fawcett JA, Gundlach H, Hanada K, Heyl A, Hicks KA, Hughes J, Lohr M, Mayer K, Melkozernov A, Murata T, Nelson DR, Pils B, Prigge M, Reiss B, Renner T, Rombauts S, Rushton PJ, Sanderfoot A, Schween G, Shiu SH, Stueber K, Theodoulou FL, Tu H, Van de Peer Y, Verrier PJ, Waters E, Wood A, Yang L, Cove D, Cuming AC, Hasebe M, Lucas S, Mishler BD, Reski R, Grigoriev IV, Quatrano RS, Boore JL. Rensing SA, et al. Among authors: nishiyama t. Science. 2008 Jan 4;319(5859):64-9. doi: 10.1126/science.1150646. Epub 2007 Dec 13. Science. 2008. PMID: 18079367
WOX13-like genes are required for reprogramming of leaf and protoplast cells into stem cells in the moss Physcomitrella patens.
Sakakibara K, Reisewitz P, Aoyama T, Friedrich T, Ando S, Sato Y, Tamada Y, Nishiyama T, Hiwatashi Y, Kurata T, Ishikawa M, Deguchi H, Rensing SA, Werr W, Murata T, Hasebe M, Laux T. Sakakibara K, et al. Among authors: nishiyama t. Development. 2014 Apr;141(8):1660-70. doi: 10.1242/dev.097444. Development. 2014. PMID: 24715456
1,499 results