Abriata LA - Search Results

1

A minimalistic cyclic ice-binding peptide from phage display.

Stevens CA, Bachtiger F, Kong XD, Abriata LA, Sosso GC, Gibson MI, Klok HA. Stevens CA, et al. Among authors: abriata la. Nat Commun. 2021 May 11;12(1):2675. doi: 10.1038/s41467-021-22883-w. Nat Commun. 2021. PMID: 33976148 Free PMC article.

2

De novo development of proteolytically resistant therapeutic peptides for oral administration.

Kong XD, Moriya J, Carle V, Pojer F, Abriata LA, Deyle K, Heinis C. Kong XD, et al. Among authors: abriata la. Nat Biomed Eng. 2020 May;4(5):560-571. doi: 10.1038/s41551-020-0556-3. Epub 2020 May 11. Nat Biomed Eng. 2020. PMID: 32393891

3

Inositol pyrophosphates promote the interaction of SPX domains with the coiled-coil motif of PHR transcription factors to regulate plant phosphate homeostasis.

Ried MK, Wild R, Zhu J, Pipercevic J, Sturm K, Broger L, Harmel RK, Abriata LA, Hothorn LA, Fiedler D, Hiller S, Hothorn M. Ried MK, et al. Among authors: abriata la. Nat Commun. 2021 Jan 15;12(1):384. doi: 10.1038/s41467-020-20681-4. Nat Commun. 2021. PMID: 33452263 Free PMC article.

4

PeSTo: parameter-free geometric deep learning for accurate prediction of protein binding interfaces.

Krapp LF, Abriata LA, Cortés Rodriguez F, Dal Peraro M. Krapp LF, et al. Among authors: abriata la. Nat Commun. 2023 Apr 18;14(1):2175. doi: 10.1038/s41467-023-37701-8. Nat Commun. 2023. PMID: 37072397 Free PMC article.

5

Molecular dynamics simulations of apocupredoxins: insights into the formation and stabilization of copper sites under entatic control.

Abriata LA, Vila AJ, Dal Peraro M. Abriata LA, et al. J Biol Inorg Chem. 2014 Jun;19(4-5):565-75. doi: 10.1007/s00775-014-1108-7. Epub 2014 Jan 30. J Biol Inorg Chem. 2014. PMID: 24477946

6

Assessing the potential of atomistic molecular dynamics simulations to probe reversible protein-protein recognition and binding.

Abriata LA, Dal Peraro M. Abriata LA, et al. Sci Rep. 2015 May 29;5:10549. doi: 10.1038/srep10549. Sci Rep. 2015. PMID: 26023027 Free PMC article.

7

Detection and sequence/structure mapping of biophysical constraints to protein variation in saturated mutational libraries and protein sequence alignments with a dedicated server.

Abriata LA, Bovigny C, Dal Peraro M. Abriata LA, et al. BMC Bioinformatics. 2016 Jun 17;17(1):242. doi: 10.1186/s12859-016-1124-4. BMC Bioinformatics. 2016. PMID: 27315797 Free PMC article.

8

Molecular Effects of Concentrated Solutes on Protein Hydration, Dynamics, and Electrostatics.

Abriata LA, Spiga E, Peraro MD. Abriata LA, et al. Biophys J. 2016 Aug 23;111(4):743-755. doi: 10.1016/j.bpj.2016.07.011. Biophys J. 2016. PMID: 27558718 Free PMC article.

9

Bottom-up de novo design of functional proteins with complex structural features.

Yang C, Sesterhenn F, Bonet J, van Aalen EA, Scheller L, Abriata LA, Cramer JT, Wen X, Rosset S, Georgeon S, Jardetzky T, Krey T, Fussenegger M, Merkx M, Correia BE. Yang C, et al. Among authors: abriata la. Nat Chem Biol. 2021 Apr;17(4):492-500. doi: 10.1038/s41589-020-00699-x. Epub 2021 Jan 4. Nat Chem Biol. 2021. PMID: 33398169

10

Dynamics of CLIMP-63 S-acylation control ER morphology.

Sandoz PA, Denhardt-Eriksson RA, Abrami L, Abriata LA, Spreemann G, Maclachlan C, Ho S, Kunz B, Hess K, Knott G, S Mesquita F, Hatzimanikatis V, van der Goot FG. Sandoz PA, et al. Among authors: abriata la. Nat Commun. 2023 Jan 17;14(1):264. doi: 10.1038/s41467-023-35921-6. Nat Commun. 2023. PMID: 36650170 Free PMC article.

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