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Page 1
Blueberry and cranberry pangenomes as a resource for future genetic studies and breeding efforts.
Yocca AE, Platts A, Alger E, Teresi S, Mengist MF, Benevenuto J, Ferrão LFV, Jacobs M, Babinski M, Magallanes-Lundback M, Bayer P, Golicz A, Humann JL, Main D, Espley RV, Chagné D, Albert NW, Montanari S, Vorsa N, Polashock J, Díaz-Garcia L, Zalapa J, Bassil NV, Munoz PR, Iorizzo M, Edger PP. Yocca AE, et al. Among authors: chagne d. Hortic Res. 2023 Oct 10;10(11):uhad202. doi: 10.1093/hr/uhad202. eCollection 2023 Nov. Hortic Res. 2023. PMID: 38023484 Free PMC article.
A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants.
Pilkington SM, Crowhurst R, Hilario E, Nardozza S, Fraser L, Peng Y, Gunaseelan K, Simpson R, Tahir J, Deroles SC, Templeton K, Luo Z, Davy M, Cheng C, McNeilage M, Scaglione D, Liu Y, Zhang Q, Datson P, De Silva N, Gardiner SE, Bassett H, Chagné D, McCallum J, Dzierzon H, Deng C, Wang YY, Barron L, Manako K, Bowen J, Foster TM, Erridge ZA, Tiffin H, Waite CN, Davies KM, Grierson EP, Laing WA, Kirk R, Chen X, Wood M, Montefiori M, Brummell DA, Schwinn KE, Catanach A, Fullerton C, Li D, Meiyalaghan S, Nieuwenhuizen N, Read N, Prakash R, Hunter D, Zhang H, McKenzie M, Knäbel M, Harris A, Allan AC, Gleave A, Chen A, Janssen BJ, Plunkett B, Ampomah-Dwamena C, Voogd C, Leif D, Lafferty D, Souleyre EJF, Varkonyi-Gasic E, Gambi F, Hanley J, Yao JL, Cheung J, David KM, Warren B, Marsh K, Snowden KC, Lin-Wang K, Brian L, Martinez-Sanchez M, Wang M, Ileperuma N, Macnee N, Campin R, McAtee P, Drummond RSM, Espley RV, Ireland HS, Wu R, Atkinson RG, Karunairetnam S, Bulley S, Chunkath S, Hanley Z, Storey R, Thrimawithana AH, Thomson S, David C, Testolin R, Huang H, Hellens RP, Schaffer RJ. Pilkington SM, et al. Among authors: chagne d. BMC Genomics. 2018 Apr 16;19(1):257. doi: 10.1186/s12864-018-4656-3. BMC Genomics. 2018. PMID: 29661190 Free PMC article.
Resistance of New Zealand Provenance Leptospermum scoparium, Kunzea robusta, Kunzea linearis, and Metrosideros excelsa to Austropuccinia psidii.
Smith GR, Ganley BJ, Chagné D, Nadarajan J, Pathirana RN, Ryan J, Arnst EA, Sutherland R, Soewarto J, Houliston G, Marsh AT, Koot E, Carnegie AJ, Menzies T, Lee DJ, Shuey LS, Pegg GS. Smith GR, et al. Among authors: chagne d. Plant Dis. 2020 Jun;104(6):1771-1780. doi: 10.1094/PDIS-11-19-2302-RE. Epub 2020 Apr 9. Plant Dis. 2020. PMID: 32272027 Free article.
CRISPR-Cas9 enrichment and long read sequencing for fine mapping in plants.
López-Girona E, Davy MW, Albert NW, Hilario E, Smart MEM, Kirk C, Thomson SJ, Chagné D. López-Girona E, et al. Among authors: chagne d. Plant Methods. 2020 Sep 1;16:121. doi: 10.1186/s13007-020-00661-x. eCollection 2020. Plant Methods. 2020. PMID: 32884578 Free PMC article.
A chromosome-scale assembly of the bilberry genome identifies a complex locus controlling berry anthocyanin composition.
Wu C, Deng C, Hilario E, Albert NW, Lafferty D, Grierson ERP, Plunkett BJ, Elborough C, Saei A, Günther CS, Ireland H, Yocca A, Edger PP, Jaakola L, Karppinen K, Grande A, Kylli R, Lehtola VP, Allan AC, Espley RV, Chagné D. Wu C, et al. Among authors: chagne d. Mol Ecol Resour. 2022 Jan;22(1):345-360. doi: 10.1111/1755-0998.13467. Epub 2021 Aug 4. Mol Ecol Resour. 2022. PMID: 34260155
92 results