Ma'ayan A - Search Results

1

An Esrrb and Nanog Cell Fate Regulatory Module Controlled by Feed Forward Loop Interactions.

Sevilla A, Papatsenko D, Mazloom AR, Xu H, Vasileva A, Unwin RD, LeRoy G, Chen EY, Garrett-Bakelman FE, Lee DF, Trinite B, Webb RL, Wang Z, Su J, Gingold J, Melnick A, Garcia BA, Whetton AD, MacArthur BD, Ma'ayan A, Lemischka IR. Sevilla A, et al. Front Cell Dev Biol. 2021 Mar 19;9:630067. doi: 10.3389/fcell.2021.630067. eCollection 2021. Front Cell Dev Biol. 2021. PMID: 33816475 Free PMC article.

2

SNAVI: Desktop application for analysis and visualization of large-scale signaling networks.

Ma'ayan A, Jenkins SL, Webb RL, Berger SI, Purushothaman SP, Abul-Husn NS, Posner JM, Flores T, Iyengar R. Ma'ayan A, et al. BMC Syst Biol. 2009 Jan 20;3:10. doi: 10.1186/1752-0509-3-10. BMC Syst Biol. 2009. PMID: 19154595 Free PMC article.

3

Toward stem cell systems biology: from molecules to networks and landscapes.

MacArthur BD, Ma'ayan A, Lemischka IR. MacArthur BD, et al. Cold Spring Harb Symp Quant Biol. 2008;73:211-5. doi: 10.1101/sqb.2008.73.061. Epub 2009 Mar 27. Cold Spring Harb Symp Quant Biol. 2008. PMID: 19329576 Free PMC article. Review.

4

Systems biology of stem cell fate and cellular reprogramming.

Macarthur BD, Ma'ayan A, Lemischka IR. Macarthur BD, et al. Nat Rev Mol Cell Biol. 2009 Oct;10(10):672-81. doi: 10.1038/nrm2766. Epub 2009 Sep 9. Nat Rev Mol Cell Biol. 2009. PMID: 19738627 Free PMC article. Review.

5

GATE: software for the analysis and visualization of high-dimensional time series expression data.

MacArthur BD, Lachmann A, Lemischka IR, Ma'ayan A. MacArthur BD, et al. Bioinformatics. 2010 Jan 1;26(1):143-4. doi: 10.1093/bioinformatics/btp628. Epub 2009 Nov 5. Bioinformatics. 2010. PMID: 19892805 Free PMC article.

6

Systems-level dynamic analyses of fate change in murine embryonic stem cells.

Lu R, Markowetz F, Unwin RD, Leek JT, Airoldi EM, MacArthur BD, Lachmann A, Rozov R, Ma'ayan A, Boyer LA, Troyanskaya OG, Whetton AD, Lemischka IR. Lu R, et al. Nature. 2009 Nov 19;462(7271):358-62. doi: 10.1038/nature08575. Nature. 2009. PMID: 19924215 Free PMC article.

7

Microdynamics and criticality of adaptive regulatory networks.

MacArthur BD, Sánchez-García RJ, Ma'ayan A. MacArthur BD, et al. Phys Rev Lett. 2010 Apr 23;104(16):168701. doi: 10.1103/PhysRevLett.104.168701. Epub 2010 Apr 19. Phys Rev Lett. 2010. PMID: 20482087 Free PMC article.

8

Mesenchymal and haematopoietic stem cells form a unique bone marrow niche.

Méndez-Ferrer S, Michurina TV, Ferraro F, Mazloom AR, Macarthur BD, Lira SA, Scadden DT, Ma'ayan A, Enikolopov GN, Frenette PS. Méndez-Ferrer S, et al. Nature. 2010 Aug 12;466(7308):829-34. doi: 10.1038/nature09262. Nature. 2010. PMID: 20703299 Free PMC article.

9

ChEA: transcription factor regulation inferred from integrating genome-wide ChIP-X experiments.

Lachmann A, Xu H, Krishnan J, Berger SI, Mazloom AR, Ma'ayan A. Lachmann A, et al. Bioinformatics. 2010 Oct 1;26(19):2438-44. doi: 10.1093/bioinformatics/btq466. Epub 2010 Aug 13. Bioinformatics. 2010. PMID: 20709693 Free PMC article.

10

Toward a complete in silico, multi-layered embryonic stem cell regulatory network.

Xu H, Schaniel C, Lemischka IR, Ma'ayan A. Xu H, et al. Wiley Interdiscip Rev Syst Biol Med. 2010 Nov-Dec;2(6):708-33. doi: 10.1002/wsbm.93. Wiley Interdiscip Rev Syst Biol Med. 2010. PMID: 20890967 Free PMC article. Review.

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