Wall JD - Search Results

1

Genomic Variation and Recent Population Histories of Spotted (Strix occidentalis) and Barred (Strix varia) Owls.

Fujito NT, Hanna ZR, Levy-Sakin M, Bowie RCK, Kwok PY, Dumbacher JP, Wall JD. Fujito NT, et al. Among authors: wall jd. Genome Biol Evol. 2021 May 7;13(5):evab066. doi: 10.1093/gbe/evab066. Genome Biol Evol. 2021. PMID: 33764456 Free PMC article.

2

Whole-Genome Analysis of Introgression Between the Spotted Owl and Barred Owl (Strix occidentalis and Strix varia, Respectively; Aves: Strigidae) in Western North America.

Hanna ZR, Dumbacher JP, Bowie RCK, Henderson JB, Wall JD. Hanna ZR, et al. Among authors: wall jd. G3 (Bethesda). 2018 Dec 10;8(12):3945-3952. doi: 10.1534/g3.118.200754. G3 (Bethesda). 2018. PMID: 30355766 Free PMC article.

3

Northern Spotted Owl (Strix occidentalis caurina) Genome: Divergence with the Barred Owl (Strix varia) and Characterization of Light-Associated Genes.

Hanna ZR, Henderson JB, Wall JD, Emerling CA, Fuchs J, Runckel C, Mindell DP, Bowie RCK, DeRisi JL, Dumbacher JP. Hanna ZR, et al. Among authors: wall jd. Genome Biol Evol. 2017 Oct 1;9(10):2522-2545. doi: 10.1093/gbe/evx158. Genome Biol Evol. 2017. PMID: 28992302 Free PMC article.

4

Genome-wide diversity in the California condor tracks its prehistoric abundance and decline.

Robinson JA, Bowie RCK, Dudchenko O, Aiden EL, Hendrickson SL, Steiner CC, Ryder OA, Mindell DP, Wall JD. Robinson JA, et al. Among authors: wall jd. Curr Biol. 2021 Jul 12;31(13):2939-2946.e5. doi: 10.1016/j.cub.2021.04.035. Epub 2021 May 13. Curr Biol. 2021. PMID: 33989525 Free article.

5

Estimating genotype error rates from high-coverage next-generation sequence data.

Wall JD, Tang LF, Zerbe B, Kvale MN, Kwok PY, Schaefer C, Risch N. Wall JD, et al. Genome Res. 2014 Nov;24(11):1734-9. doi: 10.1101/gr.168393.113. Epub 2014 Oct 10. Genome Res. 2014. PMID: 25304867 Free PMC article.

6

Accurate assembly of the olive baboon (Papio anubis) genome using long-read and Hi-C data.

Batra SS, Levy-Sakin M, Robinson J, Guillory J, Durinck S, Vilgalys TP, Kwok PY, Cox LA, Seshagiri S, Song YS, Wall JD. Batra SS, et al. Among authors: wall jd. Gigascience. 2020 Dec 7;9(12):giaa134. doi: 10.1093/gigascience/giaa134. Gigascience. 2020. PMID: 33283855 Free PMC article.

7

Evaluating the quality of the 1000 genomes project data.

Belsare S, Levy-Sakin M, Mostovoy Y, Durinck S, Chaudhuri S, Xiao M, Peterson AS, Kwok PY, Seshagiri S, Wall JD. Belsare S, et al. Among authors: wall jd. BMC Genomics. 2019 Aug 16;20(1):620. doi: 10.1186/s12864-019-5957-x. BMC Genomics. 2019. PMID: 31416423 Free PMC article.

8

A hybrid approach for de novo human genome sequence assembly and phasing.

Mostovoy Y, Levy-Sakin M, Lam J, Lam ET, Hastie AR, Marks P, Lee J, Chu C, Lin C, Džakula Ž, Cao H, Schlebusch SA, Giorda K, Schnall-Levin M, Wall JD, Kwok PY. Mostovoy Y, et al. Among authors: wall jd. Nat Methods. 2016 Jul;13(7):587-90. doi: 10.1038/nmeth.3865. Epub 2016 May 9. Nat Methods. 2016. PMID: 27159086 Free PMC article.

9

Response to Bakker et al.

Robinson JA, Bowie RCK, Dudchenko O, Aiden EL, Hendrickson SL, Steiner CC, Ryder OA, Mindell DP, Wall JD. Robinson JA, et al. Among authors: wall jd. Curr Biol. 2022 Apr 25;32(8):R358-R359. doi: 10.1016/j.cub.2022.03.049. Curr Biol. 2022. PMID: 35472421 Free article.

10

Patterns of genetic variation within and between Gibbon species.

Kim SK, Carbone L, Becquet C, Mootnick AR, Li DJ, de Jong PJ, Wall JD. Kim SK, et al. Among authors: wall jd. Mol Biol Evol. 2011 Aug;28(8):2211-8. doi: 10.1093/molbev/msr033. Epub 2011 Mar 2. Mol Biol Evol. 2011. PMID: 21368318 Free PMC article.

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