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Limited Evidence for Parallel Evolution Among Desert-Adapted Peromyscus Deer Mice.
J Hered. 2021 May 24;112(3):286-302. doi: 10.1093/jhered/esab009.
J Hered. 2021.
PMID: 33686424
Free PMC article.
A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
Rao SS, Huntley MH, Durand NC, Stamenova EK, Bochkov ID, Robinson JT, Sanborn AL, Machol I, Omer AD, Lander ES, Aiden EL.
Rao SS, et al. Among authors: bochkov id.
Cell. 2014 Dec 18;159(7):1665-80. doi: 10.1016/j.cell.2014.11.021. Epub 2014 Dec 11.
Cell. 2014.
PMID: 25497547
Free PMC article.
Item in Clipboard
Cohesin Loss Eliminates All Loop Domains.
Rao SSP, Huang SC, Glenn St Hilaire B, Engreitz JM, Perez EM, Kieffer-Kwon KR, Sanborn AL, Johnstone SE, Bascom GD, Bochkov ID, Huang X, Shamim MS, Shin J, Turner D, Ye Z, Omer AD, Robinson JT, Schlick T, Bernstein BE, Casellas R, Lander ES, Aiden EL.
Rao SSP, et al. Among authors: bochkov id.
Cell. 2017 Oct 5;171(2):305-320.e24. doi: 10.1016/j.cell.2017.09.026.
Cell. 2017.
PMID: 28985562
Free PMC article.
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Somatic structural variant formation is guided by and influences genome architecture.
Sidiropoulos N, Mardin BR, Rodríguez-González FG, Bochkov ID, Garg S, Stütz AM, Korbel JO, Aiden EL, Weischenfeldt J.
Sidiropoulos N, et al. Among authors: bochkov id.
Genome Res. 2022 Apr;32(4):643-655. doi: 10.1101/gr.275790.121. Epub 2022 Feb 17.
Genome Res. 2022.
PMID: 35177558
Free PMC article.
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Large DNA Methylation Nadirs Anchor Chromatin Loops Maintaining Hematopoietic Stem Cell Identity.
Zhang X, Jeong M, Huang X, Wang XQ, Wang X, Zhou W, Shamim MS, Gore H, Himadewi P, Liu Y, Bochkov ID, Reyes J, Doty M, Huang YH, Jung H, Heikamp E, Aiden AP, Li W, Su J, Aiden EL, Goodell MA.
Zhang X, et al. Among authors: bochkov id.
Mol Cell. 2020 May 7;78(3):506-521.e6. doi: 10.1016/j.molcel.2020.04.018.
Mol Cell. 2020.
PMID: 32386543
Free PMC article.
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Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes.
Sanborn AL, Rao SS, Huang SC, Durand NC, Huntley MH, Jewett AI, Bochkov ID, Chinnappan D, Cutkosky A, Li J, Geeting KP, Gnirke A, Melnikov A, McKenna D, Stamenova EK, Lander ES, Aiden EL.
Sanborn AL, et al. Among authors: bochkov id.
Proc Natl Acad Sci U S A. 2015 Nov 24;112(47):E6456-65. doi: 10.1073/pnas.1518552112. Epub 2015 Oct 23.
Proc Natl Acad Sci U S A. 2015.
PMID: 26499245
Free PMC article.
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