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Roadmap on biology in time varying environments.
Murugan A, Husain K, Rust MJ, Hepler C, Bass J, Pietsch JMJ, Swain PS, Jena SG, Toettcher JE, Chakraborty AK, Sprenger KG, Mora T, Walczak AM, Rivoire O, Wang S, Wood KB, Skanata A, Kussell E, Ranganathan R, Shih HY, Goldenfeld N. Murugan A, et al. Among authors: ranganathan r. Phys Biol. 2021 May 17;18(4):10.1088/1478-3975/abde8d. doi: 10.1088/1478-3975/abde8d. Phys Biol. 2021. PMID: 33477124 Free PMC article. Review.
Evolution-Based Functional Decomposition of Proteins.
Rivoire O, Reynolds KA, Ranganathan R. Rivoire O, et al. Among authors: ranganathan r. PLoS Comput Biol. 2016 Jun 2;12(6):e1004817. doi: 10.1371/journal.pcbi.1004817. eCollection 2016 Jun. PLoS Comput Biol. 2016. PMID: 27254668 Free PMC article.
Deconstruction of the Ras switching cycle through saturation mutagenesis.
Bandaru P, Shah NH, Bhattacharyya M, Barton JP, Kondo Y, Cofsky JC, Gee CL, Chakraborty AK, Kortemme T, Ranganathan R, Kuriyan J. Bandaru P, et al. Among authors: ranganathan r. Elife. 2017 Jul 7;6:e27810. doi: 10.7554/eLife.27810. Elife. 2017. PMID: 28686159 Free PMC article.
Undersampling and the inference of coevolution in proteins.
Kleeorin Y, Russ WP, Rivoire O, Ranganathan R. Kleeorin Y, et al. Among authors: ranganathan r. Cell Syst. 2023 Mar 15;14(3):210-219.e7. doi: 10.1016/j.cels.2022.12.013. Epub 2023 Jan 23. Cell Syst. 2023. PMID: 36693377 Free PMC article.
Putting Evolution to Work.
Ranganathan R. Ranganathan R. Cell. 2018 Nov 29;175(6):1449-1451. doi: 10.1016/j.cell.2018.11.015. Cell. 2018. PMID: 30500528 Free article. Review.
The Context-Dependence of Mutations: A Linkage of Formalisms.
Poelwijk FJ, Krishna V, Ranganathan R. Poelwijk FJ, et al. Among authors: ranganathan r. PLoS Comput Biol. 2016 Jun 23;12(6):e1004771. doi: 10.1371/journal.pcbi.1004771. eCollection 2016 Jun. PLoS Comput Biol. 2016. PMID: 27337695 Free PMC article. No abstract available.
297 results