Ohler U - Search Results

1

Ythdf is a N6-methyladenosine reader that modulates Fmr1 target mRNA selection and restricts axonal growth in Drosophila.

Worpenberg L, Paolantoni C, Longhi S, Mulorz MM, Lence T, Wessels HH, Dassi E, Aiello G, Sutandy FXR, Scheibe M, Edupuganti RR, Busch A, Möckel MM, Vermeulen M, Butter F, König J, Notarangelo M, Ohler U, Dieterich C, Quattrone A, Soldano A, Roignant JY. Worpenberg L, et al. Among authors: ohler u. EMBO J. 2021 Feb 15;40(4):e104975. doi: 10.15252/embj.2020104975. Epub 2021 Jan 11. EMBO J. 2021. PMID: 33428246 Free PMC article.

2

Regnase-1 and Roquin Regulate a Common Element in Inflammatory mRNAs by Spatiotemporally Distinct Mechanisms.

Mino T, Murakawa Y, Fukao A, Vandenbon A, Wessels HH, Ori D, Uehata T, Tartey S, Akira S, Suzuki Y, Vinuesa CG, Ohler U, Standley DM, Landthaler M, Fujiwara T, Takeuchi O. Mino T, et al. Among authors: ohler u. Cell. 2015 May 21;161(5):1058-1073. doi: 10.1016/j.cell.2015.04.029. Cell. 2015. PMID: 26000482 Free article.

3

The mRNA-bound proteome of the early fly embryo.

Wessels HH, Imami K, Baltz AG, Kolinski M, Beldovskaya A, Selbach M, Small S, Ohler U, Landthaler M. Wessels HH, et al. Among authors: ohler u. Genome Res. 2016 Jul;26(7):1000-9. doi: 10.1101/gr.200386.115. Epub 2016 Apr 28. Genome Res. 2016. PMID: 27197210 Free PMC article.

4

JACUSA: site-specific identification of RNA editing events from replicate sequencing data.

Piechotta M, Wyler E, Ohler U, Landthaler M, Dieterich C. Piechotta M, et al. Among authors: ohler u. BMC Bioinformatics. 2017 Jan 3;18(1):7. doi: 10.1186/s12859-016-1432-8. BMC Bioinformatics. 2017. PMID: 28049429 Free PMC article.

5

omniCLIP: probabilistic identification of protein-RNA interactions from CLIP-seq data.

Drewe-Boss P, Wessels HH, Ohler U. Drewe-Boss P, et al. Among authors: ohler u. Genome Biol. 2018 Nov 1;19(1):183. doi: 10.1186/s13059-018-1521-2. Genome Biol. 2018. PMID: 30384847 Free PMC article.

6

Deciphering human ribonucleoprotein regulatory networks.

Mukherjee N, Wessels HH, Lebedeva S, Sajek M, Ghanbari M, Garzia A, Munteanu A, Yusuf D, Farazi T, Hoell JI, Akat KM, Akalin A, Tuschl T, Ohler U. Mukherjee N, et al. Among authors: ohler u. Nucleic Acids Res. 2019 Jan 25;47(2):570-581. doi: 10.1093/nar/gky1185. Nucleic Acids Res. 2019. PMID: 30517751 Free PMC article.

7

Global identification of functional microRNA-mRNA interactions in Drosophila.

Wessels HH, Lebedeva S, Hirsekorn A, Wurmus R, Akalin A, Mukherjee N, Ohler U. Wessels HH, et al. Among authors: ohler u. Nat Commun. 2019 Apr 9;10(1):1626. doi: 10.1038/s41467-019-09586-z. Nat Commun. 2019. PMID: 30967537 Free PMC article.

8

FMRP targets distinct mRNA sequence elements to regulate protein expression.

Ascano M Jr, Mukherjee N, Bandaru P, Miller JB, Nusbaum JD, Corcoran DL, Langlois C, Munschauer M, Dewell S, Hafner M, Williams Z, Ohler U, Tuschl T. Ascano M Jr, et al. Among authors: ohler u. Nature. 2012 Dec 20;492(7429):382-6. doi: 10.1038/nature11737. Epub 2012 Dec 12. Nature. 2012. PMID: 23235829 Free PMC article.

9

Identifying RBP Targets with RIP-seq.

Wessels HH, Hirsekorn A, Ohler U, Mukherjee N. Wessels HH, et al. Among authors: ohler u. Methods Mol Biol. 2016;1358:141-52. doi: 10.1007/978-1-4939-3067-8_9. Methods Mol Biol. 2016. PMID: 26463382

10

RCAS: an RNA centric annotation system for transcriptome-wide regions of interest.

Uyar B, Yusuf D, Wurmus R, Rajewsky N, Ohler U, Akalin A. Uyar B, et al. Among authors: ohler u. Nucleic Acids Res. 2017 Jun 2;45(10):e91. doi: 10.1093/nar/gkx120. Nucleic Acids Res. 2017. PMID: 28334930 Free PMC article.

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