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Integration of human cell lines gene expression and chemical properties of drugs for Drug Induced Liver Injury prediction.
Biol Direct. 2021 Jan 9;16(1):2. doi: 10.1186/s13062-020-00286-z.
Biol Direct. 2021.
PMID: 33422118
Free PMC article.
Integration of multiple types of genetic markers for neuroblastoma may contribute to improved prediction of the overall survival.
Polewko-Klim A, Lesiński W, Mnich K, Piliszek R, Rudnicki WR.
Polewko-Klim A, et al. Among authors: lesinski w.
Biol Direct. 2018 Sep 20;13(1):17. doi: 10.1186/s13062-018-0222-9.
Biol Direct. 2018.
PMID: 30236139
Free PMC article.
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Prediction of Alternative Drug-Induced Liver Injury Classifications Using Molecular Descriptors, Gene Expression Perturbation, and Toxicology Reports.
Lesiński W, Mnich K, Rudnicki WR.
Lesiński W, et al.
Front Genet. 2021 Jul 1;12:661075. doi: 10.3389/fgene.2021.661075. eCollection 2021.
Front Genet. 2021.
PMID: 34276771
Free PMC article.
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Sensitivity analysis based on the random forest machine learning algorithm identifies candidate genes for regulation of innate and adaptive immune response of chicken.
Polewko-Klim A, Lesiński W, Golińska AK, Mnich K, Siwek M, Rudnicki WR.
Polewko-Klim A, et al. Among authors: lesinski w.
Poult Sci. 2020 Dec;99(12):6341-6354. doi: 10.1016/j.psj.2020.08.059. Epub 2020 Sep 12.
Poult Sci. 2020.
PMID: 33248550
Free PMC article.
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Stratification of amyotrophic lateral sclerosis patients: a crowdsourcing approach.
Kueffner R, Zach N, Bronfeld M, Norel R, Atassi N, Balagurusamy V, Di Camillo B, Chio A, Cudkowicz M, Dillenberger D, Garcia-Garcia J, Hardiman O, Hoff B, Knight J, Leitner ML, Li G, Mangravite L, Norman T, Wang L; ALS Stratification Consortium; Xiao J, Fang WC, Peng J, Yang C, Chang HJ, Stolovitzky G.
Kueffner R, et al.
Sci Rep. 2019 Jan 24;9(1):690. doi: 10.1038/s41598-018-36873-4.
Sci Rep. 2019.
PMID: 30679616
Free PMC article.
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Predicting human olfactory perception from chemical features of odor molecules.
Keller A, Gerkin RC, Guan Y, Dhurandhar A, Turu G, Szalai B, Mainland JD, Ihara Y, Yu CW, Wolfinger R, Vens C, Schietgat L, De Grave K, Norel R; DREAM Olfaction Prediction Consortium; Stolovitzky G, Cecchi GA, Vosshall LB, Meyer P.
Keller A, et al.
Science. 2017 Feb 24;355(6327):820-826. doi: 10.1126/science.aal2014. Epub 2017 Feb 20.
Science. 2017.
PMID: 28219971
Free PMC article.
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Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open clinical trial data.
Guinney J, Wang T, Laajala TD, Winner KK, Bare JC, Neto EC, Khan SA, Peddinti G, Airola A, Pahikkala T, Mirtti T, Yu T, Bot BM, Shen L, Abdallah K, Norman T, Friend S, Stolovitzky G, Soule H, Sweeney CJ, Ryan CJ, Scher HI, Sartor O, Xie Y, Aittokallio T, Zhou FL, Costello JC; Prostate Cancer Challenge DREAM Community.
Guinney J, et al.
Lancet Oncol. 2017 Jan;18(1):132-142. doi: 10.1016/S1470-2045(16)30560-5. Epub 2016 Nov 16.
Lancet Oncol. 2017.
PMID: 27864015
Free PMC article.
Clinical Trial.
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