Sperandio O - Search Results

1

The iPPI-DB initiative: a community-centered database of protein-protein interaction modulators.

Torchet R, Druart K, Ruano LC, Moine-Franel A, Borges H, Doppelt-Azeroual O, Brancotte B, Mareuil F, Nilges M, Ménager H, Sperandio O. Torchet R, et al. Among authors: sperandio o. Bioinformatics. 2021 Apr 9;37(1):89-96. doi: 10.1093/bioinformatics/btaa1091. Bioinformatics. 2021. PMID: 33416858 Free PMC article.

2

The FAF-Drugs2 server: a multistep engine to prepare electronic chemical compound collections.

Lagorce D, Maupetit J, Baell J, Sperandio O, Tufféry P, Miteva MA, Galons H, Villoutreix BO. Lagorce D, et al. Among authors: sperandio o. Bioinformatics. 2011 Jul 15;27(14):2018-20. doi: 10.1093/bioinformatics/btr333. Epub 2011 Jun 2. Bioinformatics. 2011. PMID: 21636592

3

Sampling of conformational ensemble for virtual screening using molecular dynamics simulations and normal mode analysis.

Moroy G, Sperandio O, Rielland S, Khemka S, Druart K, Goyal D, Perahia D, Miteva MA. Moroy G, et al. Among authors: sperandio o. Future Med Chem. 2015;7(17):2317-31. doi: 10.4155/fmc.15.150. Epub 2015 Nov 24. Future Med Chem. 2015. PMID: 26599419

4

Phylogenetic analysis of Harmonin homology domains.

Colcombet-Cazenave B, Druart K, Bonnet C, Petit C, Spérandio O, Guglielmini J, Wolff N. Colcombet-Cazenave B, et al. Among authors: sperandio o. BMC Bioinformatics. 2021 Apr 14;22(1):190. doi: 10.1186/s12859-021-04116-5. BMC Bioinformatics. 2021. PMID: 33853521 Free PMC article.

5

InDeep: 3D fully convolutional neural networks to assist in silico drug design on protein-protein interactions.

Mallet V, Checa Ruano L, Moine Franel A, Nilges M, Druart K, Bouvier G, Sperandio O. Mallet V, et al. Among authors: sperandio o. Bioinformatics. 2022 Feb 7;38(5):1261-1268. doi: 10.1093/bioinformatics/btab849. Bioinformatics. 2022. PMID: 34908131 Free PMC article.

6

A comprehensive dataset of protein-protein interactions and ligand binding pockets for advancing drug discovery.

Moine-Franel A, Mareuil F, Nilges M, Ciambur CB, Sperandio O. Moine-Franel A, et al. Among authors: sperandio o. Sci Data. 2024 Apr 20;11(1):402. doi: 10.1038/s41597-024-03233-z. Sci Data. 2024. PMID: 38643260 Free PMC article.

7

iPPI-DB: a manually curated and interactive database of small non-peptide inhibitors of protein-protein interactions.

Labbé CM, Laconde G, Kuenemann MA, Villoutreix BO, Sperandio O. Labbé CM, et al. Among authors: sperandio o. Drug Discov Today. 2013 Oct;18(19-20):958-68. doi: 10.1016/j.drudis.2013.05.003. Epub 2013 May 17. Drug Discov Today. 2013. PMID: 23688585 Review.

8

iPPI-DB: an online database of modulators of protein-protein interactions.

Labbé CM, Kuenemann MA, Zarzycka B, Vriend G, Nicolaes GA, Lagorce D, Miteva MA, Villoutreix BO, Sperandio O. Labbé CM, et al. Among authors: sperandio o. Nucleic Acids Res. 2016 Jan 4;44(D1):D542-7. doi: 10.1093/nar/gkv982. Epub 2015 Oct 1. Nucleic Acids Res. 2016. PMID: 26432833 Free PMC article.

9

Privileged Substructures to Modulate Protein-Protein Interactions.

Bosc N, Kuenemann MA, Bécot J, Vavrusa M, Cerdan AH, Sperandio O. Bosc N, et al. Among authors: sperandio o. J Chem Inf Model. 2017 Oct 23;57(10):2448-2462. doi: 10.1021/acs.jcim.7b00435. Epub 2017 Sep 27. J Chem Inf Model. 2017. PMID: 28922596

10

Fr-PPIChem: An Academic Compound Library Dedicated to Protein-Protein Interactions.

Bosc N, Muller C, Hoffer L, Lagorce D, Bourg S, Derviaux C, Gourdel ME, Rain JC, Miller TW, Villoutreix BO, Miteva MA, Bonnet P, Morelli X, Sperandio O, Roche P. Bosc N, et al. Among authors: sperandio o. ACS Chem Biol. 2020 Jun 19;15(6):1566-1574. doi: 10.1021/acschembio.0c00179. Epub 2020 May 5. ACS Chem Biol. 2020. PMID: 32320205 Free PMC article.

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