Reinders MJT - Search Results

1

Using Out-of-Batch Reference Populations to Improve Untargeted Metabolomics for Screening Inborn Errors of Metabolism.

Bongaerts M, Bonte R, Demirdas S, Jacobs EH, Oussoren E, van der Ploeg AT, Wagenmakers MAEM, Hofstra RMW, Blom HJ, Reinders MJT, Ruijter GJG. Bongaerts M, et al. Among authors: reinders mjt. Metabolites. 2020 Dec 25;11(1):8. doi: 10.3390/metabo11010008. Metabolites. 2020. PMID: 33375624 Free PMC article.

2

Integration of metabolomics with genomics: Metabolic gene prioritization using metabolomics data and genomic variant (CADD) scores.

Bongaerts M, Bonte R, Demirdas S, Huidekoper HH, Langendonk J, Wilke M, de Valk W, Blom HJ, Reinders MJT, Ruijter GJG. Bongaerts M, et al. Among authors: reinders mjt. Mol Genet Metab. 2022 Jul;136(3):199-218. doi: 10.1016/j.ymgme.2022.05.002. Epub 2022 May 25. Mol Genet Metab. 2022. PMID: 35660124 Free article.

3

Benchmarking Outlier Detection Methods for Detecting IEM Patients in Untargeted Metabolomics Data.

Bongaerts M, Kulkarni P, Zammit A, Bonte R, Kluijtmans LAJ, Blom HJ, Engelke UFH, Tax DMJ, Ruijter GJG, Reinders MJT. Bongaerts M, et al. Among authors: reinders mjt. Metabolites. 2023 Jan 7;13(1):97. doi: 10.3390/metabo13010097. Metabolites. 2023. PMID: 36677022 Free PMC article.

4

Technical Report: A Comprehensive Comparison between Different Quantification Versions of Nightingale Health's ¹H-NMR Metabolomics Platform.

Bizzarri D, Reinders MJT, Beekman M, Slagboom PE, van den Akker EB, On Behalf Of The BbmriNl. Bizzarri D, et al. Among authors: reinders mjt. Metabolites. 2023 Nov 30;13(12):1181. doi: 10.3390/metabo13121181. Metabolites. 2023. PMID: 38132863 Free PMC article.

5

CBA: Cluster-Guided Batch Alignment for Single Cell RNA-seq.

Yu W, Mahfouz A, Reinders MJT. Yu W, et al. Among authors: reinders mjt. Front Genet. 2021 Apr 13;12:644211. doi: 10.3389/fgene.2021.644211. eCollection 2021. Front Genet. 2021. PMID: 33927748 Free PMC article.

6

WisecondorFF: Improved Fetal Aneuploidy Detection from Shallow WGS through Fragment Length Analysis.

Mokveld T, Al-Ars Z, Sistermans EA, Reinders M. Mokveld T, et al. Diagnostics (Basel). 2021 Dec 28;12(1):59. doi: 10.3390/diagnostics12010059. Diagnostics (Basel). 2021. PMID: 35054227 Free PMC article.

7

CHOP: haplotype-aware path indexing in population graphs.

Mokveld T, Linthorst J, Al-Ars Z, Holstege H, Reinders M. Mokveld T, et al. Genome Biol. 2020 Mar 11;21(1):65. doi: 10.1186/s13059-020-01963-y. Genome Biol. 2020. PMID: 32160922 Free PMC article.

8

Differential analysis of binarized single-cell RNA sequencing data captures biological variation.

Bouland GA, Mahfouz A, Reinders MJT. Bouland GA, et al. Among authors: reinders mjt. NAR Genom Bioinform. 2021 Dec 22;3(4):lqab118. doi: 10.1093/nargab/lqab118. eCollection 2021 Dec. NAR Genom Bioinform. 2021. PMID: 34988441 Free PMC article.

9

Metabolomic predictors of phenotypic traits can replace and complement measured clinical variables in population-scale expression profiling studies.

Niehues A, Bizzarri D, Reinders MJT, Slagboom PE, van Gool AJ, van den Akker EB; BBMRI-NL BIOS consortium; BBMRI-NL Metabolomics consortium; 't Hoen PAC. Niehues A, et al. Among authors: reinders mjt. BMC Genomics. 2022 Jul 31;23(1):546. doi: 10.1186/s12864-022-08771-7. BMC Genomics. 2022. PMID: 35907790 Free PMC article.

10

Predicting variant deleteriousness in non-human species: applying the CADD approach in mouse.

Groß C, de Ridder D, Reinders M. Groß C, et al. BMC Bioinformatics. 2018 Oct 12;19(1):373. doi: 10.1186/s12859-018-2337-5. BMC Bioinformatics. 2018. PMID: 30314430 Free PMC article.

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