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Comparison of target enrichment strategies for ancient pathogen DNA.
Furtwängler A, Neukamm J, Böhme L, Reiter E, Vollstedt M, Arora N, Singh P, Cole ST, Knauf S, Calvignac-Spencer S, Krause-Kyora B, Krause J, Schuenemann VJ, Herbig A. Furtwängler A, et al. Biotechniques. 2020 Dec;69(6):455-459. doi: 10.2144/btn-2020-0100. Epub 2020 Nov 2. Biotechniques. 2020. PMID: 33135465 Free article.
A15 Rapid radiation of treponema pallidum pertenue in wild non-human primates.
Düx A, Schuenemann VJ, Gogarten JF, De Nys HM, Nieselt K, Mayhew MA, Leendertz FH, Calvignac-Spencer S, Krause J. Düx A, et al. Virus Evol. 2017 Mar 5;3(Suppl 1):vew036.014. doi: 10.1093/ve/vew036.014. eCollection 2017 Mar. Virus Evol. 2017. PMID: 28845266 Free PMC article. No abstract available.
Nonhuman primates across sub-Saharan Africa are infected with the yaws bacterium Treponema pallidum subsp. pertenue.
Knauf S, Gogarten JF, Schuenemann VJ, De Nys HM, Düx A, Strouhal M, Mikalová L, Bos KI, Armstrong R, Batamuzi EK, Chuma IS, Davoust B, Diatta G, Fyumagwa RD, Kazwala RR, Keyyu JD, Lejora IAV, Levasseur A, Liu H, Mayhew MA, Mediannikov O, Raoult D, Wittig RM, Roos C, Leendertz FH, Šmajs D, Nieselt K, Krause J, Calvignac-Spencer S. Knauf S, et al. Emerg Microbes Infect. 2018 Sep 19;7(1):157. doi: 10.1038/s41426-018-0156-4. Emerg Microbes Infect. 2018. PMID: 30228266 Free PMC article. No abstract available.
Geographically structured genomic diversity of non-human primate-infecting Treponema pallidum subsp. pertenue.
Mubemba B, Gogarten JF, Schuenemann VJ, Düx A, Lang A, Nowak K, Pléh K, Reiter E, Ulrich M, Agbor A, Brazzola G, Deschner T, Dieguez P, Granjon AC, Jones S, Junker J, Wessling E, Arandjelovic M, Kuehl H, Wittig RM, Leendertz FH, Calvignac-Spencer S. Mubemba B, et al. Microb Genom. 2020 Nov;6(11):mgen000463. doi: 10.1099/mgen.0.000463. Microb Genom. 2020. PMID: 33125317 Free PMC article.
Leprosy in wild chimpanzees.
Hockings KJ, Mubemba B, Avanzi C, Pleh K, Düx A, Bersacola E, Bessa J, Ramon M, Metzger S, Patrono LV, Jaffe JE, Benjak A, Bonneaud C, Busso P, Couacy-Hymann E, Gado M, Gagneux S, Johnson RC, Kodio M, Lynton-Jenkins J, Morozova I, Mätz-Rensing K, Regalla A, Said AR, Schuenemann VJ, Sow SO, Spencer JS, Ulrich M, Zoubi H, Cole ST, Wittig RM, Calvignac-Spencer S, Leendertz FH. Hockings KJ, et al. Nature. 2021 Oct;598(7882):652-656. doi: 10.1038/s41586-021-03968-4. Epub 2021 Oct 13. Nature. 2021. PMID: 34646009 Free PMC article.
Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic.
Patrono LV, Vrancken B, Budt M, Düx A, Lequime S, Boral S, Gilbert MTP, Gogarten JF, Hoffmann L, Horst D, Merkel K, Morens D, Prepoint B, Schlotterbeck J, Schuenemann VJ, Suchard MA, Taubenberger JK, Tenkhoff L, Urban C, Widulin N, Winter E, Worobey M, Schnalke T, Wolff T, Lemey P, Calvignac-Spencer S. Patrono LV, et al. Nat Commun. 2022 May 10;13(1):2314. doi: 10.1038/s41467-022-29614-9. Nat Commun. 2022. PMID: 35538057 Free PMC article.
Metabarcoding of eukaryotic parasite communities describes diverse parasite assemblages spanning the primate phylogeny.
Gogarten JF, Calvignac-Spencer S, Nunn CL, Ulrich M, Saiepour N, Nielsen HV, Deschner T, Fichtel C, Kappeler PM, Knauf S, Müller-Klein N, Ostner J, Robbins MM, Sangmaneedet S, Schülke O, Surbeck M, Wittig RM, Sliwa A, Strube C, Leendertz FH, Roos C, Noll A. Gogarten JF, et al. Mol Ecol Resour. 2020 Jan;20(1):204-215. doi: 10.1111/1755-0998.13101. Epub 2019 Nov 4. Mol Ecol Resour. 2020. PMID: 31600853
97 results