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Effect of DNA extraction and sample preservation method on rumen bacterial population.
Fliegerova K, Tapio I, Bonin A, Mrazek J, Callegari ML, Bani P, Bayat A, Vilkki J, Kopečný J, Shingfield KJ, Boyer F, Coissac E, Taberlet P, Wallace RJ. Fliegerova K, et al. Among authors: bonin a. Anaerobe. 2014 Oct;29:80-4. doi: 10.1016/j.anaerobe.2013.09.015. Epub 2013 Oct 12. Anaerobe. 2014. PMID: 24125910
obitools: a unix-inspired software package for DNA metabarcoding.
Boyer F, Mercier C, Bonin A, Le Bras Y, Taberlet P, Coissac E. Boyer F, et al. Among authors: bonin a. Mol Ecol Resour. 2016 Jan;16(1):176-82. doi: 10.1111/1755-0998.12428. Epub 2015 May 26. Mol Ecol Resour. 2016. PMID: 25959493
Body size determines soil community assembly in a tropical forest.
Zinger L, Taberlet P, Schimann H, Bonin A, Boyer F, De Barba M, Gaucher P, Gielly L, Giguet-Covex C, Iribar A, Réjou-Méchain M, Rayé G, Rioux D, Schilling V, Tymen B, Viers J, Zouiten C, Thuiller W, Coissac E, Chave J. Zinger L, et al. Among authors: bonin a. Mol Ecol. 2019 Feb;28(3):528-543. doi: 10.1111/mec.14919. Epub 2018 Nov 22. Mol Ecol. 2019. PMID: 30375061
DNA metabarcoding-Need for robust experimental designs to draw sound ecological conclusions.
Zinger L, Bonin A, Alsos IG, Bálint M, Bik H, Boyer F, Chariton AA, Creer S, Coissac E, Deagle BE, De Barba M, Dickie IA, Dumbrell AJ, Ficetola GF, Fierer N, Fumagalli L, Gilbert MTP, Jarman S, Jumpponen A, Kauserud H, Orlando L, Pansu J, Pawlowski J, Tedersoo L, Thomsen PF, Willerslev E, Taberlet P. Zinger L, et al. Among authors: bonin a. Mol Ecol. 2019 Apr;28(8):1857-1862. doi: 10.1111/mec.15060. Epub 2019 Apr 29. Mol Ecol. 2019. PMID: 31033079 Free article. No abstract available.
Morphological vs. DNA metabarcoding approaches for the evaluation of stream ecological status with benthic invertebrates: Testing different combinations of markers and strategies of data filtering.
Meyer A, Boyer F, Valentini A, Bonin A, Ficetola GF, Beisel JN, Bouquerel J, Wagner P, Gaboriaud C, Leese F, Dejean T, Taberlet P, Usseglio-Polatera P. Meyer A, et al. Among authors: bonin a. Mol Ecol. 2021 Jul;30(13):3203-3220. doi: 10.1111/mec.15723. Epub 2020 Nov 23. Mol Ecol. 2021. PMID: 33150613 Free article.
146 results