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Detection of SARS-CoV-2 RNA by multiplex RT-qPCR.
Kudo E, Israelow B, Vogels CBF, Lu P, Wyllie AL, Tokuyama M, Venkataraman A, Brackney DE, Ott IM, Petrone ME, Earnest R, Lapidus S, Muenker MC, Moore AJ, Casanovas-Massana A; Yale IMPACT Research Team; Omer SB, Dela Cruz CS, Farhadian SF, Ko AI, Grubaugh ND, Iwasaki A. Kudo E, et al. Among authors: brackney de. PLoS Biol. 2020 Oct 7;18(10):e3000867. doi: 10.1371/journal.pbio.3000867. eCollection 2020 Oct. PLoS Biol. 2020. PMID: 33027248 Free PMC article.
Mosquitoes Transmit Unique West Nile Virus Populations during Each Feeding Episode.
Grubaugh ND, Fauver JR, Rückert C, Weger-Lucarelli J, Garcia-Luna S, Murrieta RA, Gendernalik A, Smith DR, Brackney DE, Ebel GD. Grubaugh ND, et al. Among authors: brackney de. Cell Rep. 2017 Apr 25;19(4):709-718. doi: 10.1016/j.celrep.2017.03.076. Cell Rep. 2017. PMID: 28445723 Free PMC article.
Adventitious viruses persistently infect three commonly used mosquito cell lines.
Weger-Lucarelli J, Rückert C, Grubaugh ND, Misencik MJ, Armstrong PM, Stenglein MD, Ebel GD, Brackney DE. Weger-Lucarelli J, et al. Among authors: brackney de. Virology. 2018 Aug;521:175-180. doi: 10.1016/j.virol.2018.06.007. Epub 2018 Jun 26. Virology. 2018. PMID: 29957338 Free PMC article.
An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar.
Grubaugh ND, Gangavarapu K, Quick J, Matteson NL, De Jesus JG, Main BJ, Tan AL, Paul LM, Brackney DE, Grewal S, Gurfield N, Van Rompay KKA, Isern S, Michael SF, Coffey LL, Loman NJ, Andersen KG. Grubaugh ND, et al. Among authors: brackney de, de jesus jg. Genome Biol. 2019 Jan 8;20(1):8. doi: 10.1186/s13059-018-1618-7. Genome Biol. 2019. PMID: 30621750 Free PMC article.
Pooling saliva to increase SARS-CoV-2 testing capacity.
Watkins AE, Fenichel EP, Weinberger DM, Vogels CBF, Brackney DE, Casanovas-Massana A, Campbell M, Fournier J, Bermejo S, Datta R; Yale IMPACT Research Team; Dela Cruz CS, Farhadian SF, Iwasaki A, Ko AI, Grubaugh ND, Wyllie AL. Watkins AE, et al. Among authors: brackney de. medRxiv [Preprint]. 2020 Sep 3:2020.09.02.20183830. doi: 10.1101/2020.09.02.20183830. medRxiv. 2020. PMID: 32909003 Free PMC article. Updated. Preprint.
Measurement of SARS-CoV-2 RNA in wastewater tracks community infection dynamics.
Peccia J, Zulli A, Brackney DE, Grubaugh ND, Kaplan EH, Casanovas-Massana A, Ko AI, Malik AA, Wang D, Wang M, Warren JL, Weinberger DM, Arnold W, Omer SB. Peccia J, et al. Among authors: brackney de. Nat Biotechnol. 2020 Oct;38(10):1164-1167. doi: 10.1038/s41587-020-0684-z. Epub 2020 Sep 18. Nat Biotechnol. 2020. PMID: 32948856 Free PMC article.
SalivaDirect: A simplified and flexible platform to enhance SARS-CoV-2 testing capacity.
Vogels CBF, Watkins AE, Harden CA, Brackney DE, Shafer J, Wang J, Caraballo C, Kalinich CC, Ott IM, Fauver JR, Kudo E, Lu P, Venkataraman A, Tokuyama M, Moore AJ, Muenker MC, Casanovas-Massana A, Fournier J, Bermejo S, Campbell M, Datta R, Nelson A; Yale IMPACT Research Team; Dela Cruz CS, Ko AI, Iwasaki A, Krumholz HM, Matheus JD, Hui P, Liu C, Farhadian SF, Sikka R, Wyllie AL, Grubaugh ND. Vogels CBF, et al. Among authors: brackney de. Med. 2021 Mar 12;2(3):263-280.e6. doi: 10.1016/j.medj.2020.12.010. Epub 2020 Dec 26. Med. 2021. PMID: 33521748 Free PMC article.
72 results