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SICaRiO: short indel call filtering with boosting.
Brief Bioinform. 2021 Jul 20;22(4):bbaa238. doi: 10.1093/bib/bbaa238.
Brief Bioinform. 2021.
PMID: 33003198
A protein-dependent side-chain rotamer library.
Bhuyan MS, Gao X.
Bhuyan MS, et al.
BMC Bioinformatics. 2011 Dec 14;12 Suppl 14(Suppl 14):S10. doi: 10.1186/1471-2105-12-S14-S10.
BMC Bioinformatics. 2011.
PMID: 22373394
Free PMC article.
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Effects of cytosine methylation on transcription factor binding sites.
Medvedeva YA, Khamis AM, Kulakovskiy IV, Ba-Alawi W, Bhuyan MS, Kawaji H, Lassmann T, Harbers M, Forrest AR, Bajic VB; FANTOM consortium.
Medvedeva YA, et al.
BMC Genomics. 2014 Mar 26;15:119. doi: 10.1186/1471-2164-15-119.
BMC Genomics. 2014.
PMID: 24669864
Free PMC article.
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