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Integrated chromosomal and plasmid sequence analyses reveal diverse modes of carbapenemase gene spread among Klebsiella pneumoniae.
David S, Cohen V, Reuter S, Sheppard AE, Giani T, Parkhill J; European Survey of Carbapenemase-Producing Enterobacteriaceae (EuSCAPE) Working Group; ESCMID Study Group for Epidemiological Markers (ESGEM); Rossolini GM, Feil EJ, Grundmann H, Aanensen DM. David S, et al. Among authors: aanensen dm. Proc Natl Acad Sci U S A. 2020 Oct 6;117(40):25043-25054. doi: 10.1073/pnas.2003407117. Epub 2020 Sep 23. Proc Natl Acad Sci U S A. 2020. PMID: 32968015 Free PMC article.
Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes.
Bentley SD, Aanensen DM, Mavroidi A, Saunders D, Rabbinowitsch E, Collins M, Donohoe K, Harris D, Murphy L, Quail MA, Samuel G, Skovsted IC, Kaltoft MS, Barrell B, Reeves PR, Parkhill J, Spratt BG. Bentley SD, et al. Among authors: aanensen dm. PLoS Genet. 2006 Mar;2(3):e31. doi: 10.1371/journal.pgen.0020031. Epub 2006 Mar 10. PLoS Genet. 2006. PMID: 16532061 Free PMC article.
MLST of housekeeping genes captures geographic population structure and suggests a European origin of Borrelia burgdorferi.
Margos G, Gatewood AG, Aanensen DM, Hanincová K, Terekhova D, Vollmer SA, Cornet M, Piesman J, Donaghy M, Bormane A, Hurn MA, Feil EJ, Fish D, Casjens S, Wormser GP, Schwartz I, Kurtenbach K. Margos G, et al. Among authors: aanensen dm. Proc Natl Acad Sci U S A. 2008 Jun 24;105(25):8730-5. doi: 10.1073/pnas.0800323105. Epub 2008 Jun 23. Proc Natl Acad Sci U S A. 2008. PMID: 18574151 Free PMC article.
Molecular tracing of the emergence, adaptation, and transmission of hospital-associated methicillin-resistant Staphylococcus aureus.
McAdam PR, Templeton KE, Edwards GF, Holden MT, Feil EJ, Aanensen DM, Bargawi HJ, Spratt BG, Bentley SD, Parkhill J, Enright MC, Holmes A, Girvan EK, Godfrey PA, Feldgarden M, Kearns AM, Rambaut A, Robinson DA, Fitzgerald JR. McAdam PR, et al. Among authors: aanensen dm. Proc Natl Acad Sci U S A. 2012 Jun 5;109(23):9107-12. doi: 10.1073/pnas.1202869109. Epub 2012 May 14. Proc Natl Acad Sci U S A. 2012. PMID: 22586109 Free PMC article.
A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic.
Holden MT, Hsu LY, Kurt K, Weinert LA, Mather AE, Harris SR, Strommenger B, Layer F, Witte W, de Lencastre H, Skov R, Westh H, Zemlicková H, Coombs G, Kearns AM, Hill RL, Edgeworth J, Gould I, Gant V, Cooke J, Edwards GF, McAdam PR, Templeton KE, McCann A, Zhou Z, Castillo-Ramírez S, Feil EJ, Hudson LO, Enright MC, Balloux F, Aanensen DM, Spratt BG, Fitzgerald JR, Parkhill J, Achtman M, Bentley SD, Nübel U. Holden MT, et al. Among authors: aanensen dm. Genome Res. 2013 Apr;23(4):653-64. doi: 10.1101/gr.147710.112. Epub 2013 Jan 8. Genome Res. 2013. PMID: 23299977 Free PMC article.
Genetic relationships of Vibrio parahaemolyticus isolates from clinical, human carrier, and environmental sources in Thailand, determined by multilocus sequence analysis.
Theethakaew C, Feil EJ, Castillo-Ramírez S, Aanensen DM, Suthienkul O, Neil DM, Davies RL. Theethakaew C, et al. Among authors: aanensen dm. Appl Environ Microbiol. 2013 Apr;79(7):2358-70. doi: 10.1128/AEM.03067-12. Epub 2013 Feb 1. Appl Environ Microbiol. 2013. PMID: 23377932 Free PMC article.
Dense genomic sampling identifies highways of pneumococcal recombination.
Chewapreecha C, Harris SR, Croucher NJ, Turner C, Marttinen P, Cheng L, Pessia A, Aanensen DM, Mather AE, Page AJ, Salter SJ, Harris D, Nosten F, Goldblatt D, Corander J, Parkhill J, Turner P, Bentley SD. Chewapreecha C, et al. Among authors: aanensen dm. Nat Genet. 2014 Mar;46(3):305-309. doi: 10.1038/ng.2895. Epub 2014 Feb 9. Nat Genet. 2014. PMID: 24509479 Free PMC article.
153 results