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An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona.
Ladner JT, Larsen BB, Bowers JR, Hepp CM, Bolyen E, Folkerts M, Sheridan K, Pfeiffer A, Yaglom H, Lemmer D, Sahl JW, Kaelin EA, Maqsood R, Bokulich NA, Quirk G, Watts TD, Komatsu KK, Waddell V, Lim ES, Caporaso JG, Engelthaler DM, Worobey M, Keim P. Ladner JT, et al. Among authors: hepp cm. mBio. 2020 Sep 4;11(5):e02107-20. doi: 10.1128/mBio.02107-20. mBio. 2020. PMID: 32887735 Free PMC article.
Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus.
Driebe EM, Sahl JW, Roe C, Bowers JR, Schupp JM, Gillece JD, Kelley E, Price LB, Pearson TR, Hepp CM, Brzoska PM, Cummings CA, Furtado MR, Andersen PS, Stegger M, Engelthaler DM, Keim PS. Driebe EM, et al. Among authors: hepp cm. PLoS One. 2015 Jul 10;10(7):e0130955. doi: 10.1371/journal.pone.0130955. eCollection 2015. PLoS One. 2015. PMID: 26161978 Free PMC article.
Local Population Structure and Patterns of Western Hemisphere Dispersal for Coccidioides spp., the Fungal Cause of Valley Fever.
Engelthaler DM, Roe CC, Hepp CM, Teixeira M, Driebe EM, Schupp JM, Gade L, Waddell V, Komatsu K, Arathoon E, Logemann H, Thompson GR 3rd, Chiller T, Barker B, Keim P, Litvintseva AP. Engelthaler DM, et al. Among authors: hepp cm. mBio. 2016 Apr 26;7(2):e00550-16. doi: 10.1128/mBio.00550-16. mBio. 2016. PMID: 27118594 Free PMC article.
Massive dispersal of Coxiella burnetii among cattle across the United States.
Olivas S, Hornstra H, Priestley RA, Kaufman E, Hepp C, Sonderegger DL, Handady K, Massung RF, Keim P, Kersh GJ, Pearson T. Olivas S, et al. Microb Genom. 2016 Aug 25;2(8):e000068. doi: 10.1099/mgen.0.000068. eCollection 2016 Aug. Microb Genom. 2016. PMID: 28348863 Free PMC article.
NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats.
Sahl JW, Lemmer D, Travis J, Schupp JM, Gillece JD, Aziz M, Driebe EM, Drees KP, Hicks ND, Williamson CHD, Hepp CM, Smith DE, Roe C, Engelthaler DM, Wagner DM, Keim P. Sahl JW, et al. Among authors: hepp cm. Microb Genom. 2016 Aug 25;2(8):e000074. doi: 10.1099/mgen.0.000074. eCollection 2016 Aug. Microb Genom. 2016. PMID: 28348869 Free PMC article.
Temporal phylogeography of Yersinia pestis in Madagascar: Insights into the long-term maintenance of plague.
Vogler AJ, Andrianaivoarimanana V, Telfer S, Hall CM, Sahl JW, Hepp CM, Centner H, Andersen G, Birdsell DN, Rahalison L, Nottingham R, Keim P, Wagner DM, Rajerison M. Vogler AJ, et al. Among authors: hepp cm. PLoS Negl Trop Dis. 2017 Sep 5;11(9):e0005887. doi: 10.1371/journal.pntd.0005887. eCollection 2017 Sep. PLoS Negl Trop Dis. 2017. PMID: 28873412 Free PMC article.
Dating the Cryptococcus gattii Dispersal to the North American Pacific Northwest.
Roe CC, Bowers J, Oltean H, DeBess E, Dufresne PJ, McBurney S, Overy DP, Wanke B, Lysen C, Chiller T, Meyer W, Thompson GR 3rd, Lockhart SR, Hepp CM, Engelthaler DM. Roe CC, et al. Among authors: hepp cm. mSphere. 2018 Jan 17;3(1):e00499-17. doi: 10.1128/mSphere.00499-17. eCollection 2018 Jan-Feb. mSphere. 2018. PMID: 29359190 Free PMC article.
49 results