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Terabase Metagenome Sequencing of Grassland Soil Microbiomes.
Nelson WC, Anderson LN, Wu R, McDermott JE, Bell SL, Jumpponen A, Fansler SJ, Tyrrell KJ, Farris Y, Hofmockel KS, Jansson JK. Nelson WC, et al. Among authors: jumpponen a. Microbiol Resour Announc. 2020 Aug 6;9(32):e00718-20. doi: 10.1128/MRA.00718-20. Microbiol Resour Announc. 2020. PMID: 32763940 Free PMC article.
FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus.
Prestat E, David MM, Hultman J, Taş N, Lamendella R, Dvornik J, Mackelprang R, Myrold DD, Jumpponen A, Tringe SG, Holman E, Mavromatis K, Jansson JK. Prestat E, et al. Among authors: jumpponen a. Nucleic Acids Res. 2014 Oct 29;42(19):e145. doi: 10.1093/nar/gku702. Epub 2014 Sep 26. Nucleic Acids Res. 2014. PMID: 25260589 Free PMC article.
Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations.
Roy Chowdhury T, Lee JY, Bottos EM, Brislawn CJ, White RA 3rd, Bramer LM, Brown J, Zucker JD, Kim YM, Jumpponen A, Rice CW, Fansler SJ, Metz TO, McCue LA, Callister SJ, Song HS, Jansson JK. Roy Chowdhury T, et al. Among authors: jumpponen a. mSystems. 2019 Jun 11;4(4):e00061-19. doi: 10.1128/mSystems.00061-19. mSystems. 2019. PMID: 31186334 Free PMC article.
A Mineral-Doped Micromodel Platform Demonstrates Fungal Bridging of Carbon Hot Spots and Hyphal Transport of Mineral-Derived Nutrients.
Bhattacharjee A, Qafoku O, Richardson JA, Anderson LN, Schwarz K, Bramer LM, Lomas GX, Orton DJ, Zhu Z, Engelhard MH, Bowden ME, Nelson WC, Jumpponen A, Jansson JK, Hofmockel KS, Anderton CR. Bhattacharjee A, et al. Among authors: jumpponen a. mSystems. 2022 Dec 20;7(6):e0091322. doi: 10.1128/msystems.00913-22. Epub 2022 Nov 17. mSystems. 2022. PMID: 36394319 Free PMC article.
Home-field advantage affects the local adaptive interaction between Andropogon gerardii ecotypes and root-associated bacterial communities.
Kazarina A, Sarkar S, Thapa S, Heeren L, Kamke A, Ward K, Hartung E, Ran Q, Galliart M, Jumpponen A, Johnson L, Lee STM. Kazarina A, et al. Among authors: jumpponen a. Microbiol Spectr. 2023 Aug 22;11(5):e0020823. doi: 10.1128/spectrum.00208-23. Online ahead of print. Microbiol Spectr. 2023. PMID: 37606438 Free PMC article.
84 results