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Generic Context-Aware Group Contributions.
Flamm C, Hellmuth M, Merkle D, Nojgaard N, Stadler PF. Flamm C, et al. Among authors: hellmuth m. IEEE/ACM Trans Comput Biol Bioinform. 2022 Jan-Feb;19(1):429-442. doi: 10.1109/TCBB.2020.2998948. Epub 2022 Feb 3. IEEE/ACM Trans Comput Biol Bioinform. 2022. PMID: 32750852
Visualization of graph products.
Jänicke S, Heine C, Hellmuth M, Stadler PF, Scheuermann G. Jänicke S, et al. Among authors: hellmuth m. IEEE Trans Vis Comput Graph. 2010 Nov-Dec;16(6):1082-9. doi: 10.1109/TVCG.2010.217. IEEE Trans Vis Comput Graph. 2010. PMID: 20975146
Orthology relations, symbolic ultrametrics, and cographs.
Hellmuth M, Hernandez-Rosales M, Huber KT, Moulton V, Stadler PF, Wieseke N. Hellmuth M, et al. J Math Biol. 2013 Jan;66(1-2):399-420. doi: 10.1007/s00285-012-0525-x. Epub 2012 Mar 29. J Math Biol. 2013. PMID: 22456957
Phylogenomics with paralogs.
Hellmuth M, Wieseke N, Lechner M, Lenhof HP, Middendorf M, Stadler PF. Hellmuth M, et al. Proc Natl Acad Sci U S A. 2015 Feb 17;112(7):2058-63. doi: 10.1073/pnas.1412770112. Epub 2015 Feb 2. Proc Natl Acad Sci U S A. 2015. PMID: 25646426 Free PMC article.
Time-consistent reconciliation maps and forbidden time travel.
Nøjgaard N, Geiß M, Merkle D, Stadler PF, Wieseke N, Hellmuth M. Nøjgaard N, et al. Among authors: hellmuth m. Algorithms Mol Biol. 2018 Feb 6;13:2. doi: 10.1186/s13015-018-0121-8. eCollection 2018. Algorithms Mol Biol. 2018. PMID: 29441122 Free PMC article.
Reconstructing gene trees from Fitch's xenology relation.
Geiß M, Anders J, Stadler PF, Wieseke N, Hellmuth M. Geiß M, et al. Among authors: hellmuth m. J Math Biol. 2018 Nov;77(5):1459-1491. doi: 10.1007/s00285-018-1260-8. Epub 2018 Jun 27. J Math Biol. 2018. PMID: 29951855
Best match graphs.
Geiß M, Chávez E, González Laffitte M, López Sánchez A, Stadler BMR, Valdivia DI, Hellmuth M, Hernández Rosales M, Stadler PF. Geiß M, et al. Among authors: hellmuth m. J Math Biol. 2019 Jun;78(7):2015-2057. doi: 10.1007/s00285-019-01332-9. Epub 2019 Apr 9. J Math Biol. 2019. PMID: 30968198 Free PMC article.
39 results