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Journal of Open Source Software (JOSS): design and first-year review.
Smith AM, Niemeyer KE, Katz DS, Barba LA, Githinji G, Gymrek M, Huff KD, Madan CR, Mayes AC, Moerman KM, Prins P, Ram K, Rokem A, Teal TK, Guimera RV, Vanderplas JT. Smith AM, et al. Among authors: gymrek m. PeerJ Prepr. 2018;4:e147. doi: 10.7717/peerj-cs.147. Epub 2018 Feb 12. PeerJ Prepr. 2018. PMID: 32704456 Free PMC article.
Targeted genotyping of variable number tandem repeats with adVNTR.
Bakhtiari M, Shleizer-Burko S, Gymrek M, Bansal V, Bafna V. Bakhtiari M, et al. Among authors: gymrek m. Genome Res. 2018 Nov;28(11):1709-1719. doi: 10.1101/gr.235119.118. Epub 2018 Oct 23. Genome Res. 2018. PMID: 30352806 Free PMC article.
Recommendations for open data science.
Gymrek M, Farjoun Y. Gymrek M, et al. Gigascience. 2016 May 18;5:22. doi: 10.1186/s13742-016-0127-4. eCollection 2016. Gigascience. 2016. PMID: 27195107 Free PMC article.
TRTools: a toolkit for genome-wide analysis of tandem repeats.
Mousavi N, Margoliash J, Pusarla N, Saini S, Yanicky R, Gymrek M. Mousavi N, et al. Among authors: gymrek m. Bioinformatics. 2021 May 5;37(5):731-733. doi: 10.1093/bioinformatics/btaa736. Bioinformatics. 2021. PMID: 32805020 Free PMC article.
Missing heritability may be hiding in repeats.
Gymrek M, Goren A. Gymrek M, et al. Science. 2021 Sep 24;373(6562):1440-1441. doi: 10.1126/science.abl7794. Epub 2021 Sep 23. Science. 2021. PMID: 34554784
A global reference for human genetic variation.
1000 Genomes Project Consortium; Auton A, Brooks LD, Durbin RM, Garrison EP, Kang HM, Korbel JO, Marchini JL, McCarthy S, McVean GA, Abecasis GR. 1000 Genomes Project Consortium, et al. Nature. 2015 Oct 1;526(7571):68-74. doi: 10.1038/nature15393. Nature. 2015. PMID: 26432245 Free PMC article.
A genomic view of short tandem repeats.
Gymrek M. Gymrek M. Curr Opin Genet Dev. 2017 Jun;44:9-16. doi: 10.1016/j.gde.2017.01.012. Epub 2017 Feb 16. Curr Opin Genet Dev. 2017. PMID: 28213161 Review.
61 results